Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1999 ATGGCCGACGCCGCTTCCAACAAACCCTCTGGCAGCGGCGCCAACAAGAAGGTCGGCGCTAATACCCTCTTGTTGGGTCGATTCGAGGTCGGCAAGCTTCTCGGCCATGGCAACTTCGCTAAGGTCTACCATGCTCGCAATGTAAAATCCGGCGAAGGTGTAGCCATCAAGGTCATTGACAAGGAGAAAATCCTCAAGAGCGGCCTCGTTGCTCACATCAAGCGCGAGATCTCAATCCTCCGACGAGTCCGACACCCTAACATCGTTCAGCTCTTCGAGGTCATGGCCACCAAGGCCAAAATCTATTTTGTGATGGAATATGTTCGTGGAGGTGAGCTATTCAATAAAGTCGCTAAAGGTCGTTTGAAAGAGGAAAGTGCCAGGAAGTACTTTCAGCAATTGATCTCCGCCGTCAGTTTCTGCCACGCGAGAGGGGTATTTCACAGGGATCTCAAGCCTGAAAACTTACTGCTCGACGAAAATGGGGATCTCAAGGTGTCTGATTTTGGATTGAGTGCTGTATCTGATCAAATTCGGCAAGATGGGTTGTTTCATACATTTTGTGGGACTCCTGCTTATGTTGCCCCTGAGGTATTGGCTAGAAAAGGTTATGATGGGGCAAAAGTTGATGTTTGGGCTTGTGGGGTTGTTCTGTTTGTTTTGATGGCTGGTTACTTGCCCTTCCACGACCAGAATGTCATGGCAATGTACAAGAAGATTTACAGGGGTGAGTTCAGATGTCCCAAGTGGTTCACACCCGATCTCACTCGGCTTGTGACTCGTCTTCTCGATACAAACCCGGAAACCCGAATTTCCATTCCGGAGATCATGGAGAACCGGTGGTTCAAAAAAGGGTTCAAACAGATAAAGTTCTATGTGGAGGATGATAAACTCTGTAACATTGATGATAAGATGGACAAGTTTGATGATATAGAATCAATGTCAGACAACTCAGTATCAGAATCTGATTCCGAGCTAGAGACTAGAAGAAGAAAGGCTTCACTTCCCAGACCAGCGAGCTTGAATGCATTTGACATAATATCATTTTCTCCTGGTTTTGATCTTTCTGGGTTGTTTGAGGAGAAGGGGGATGAGGCGAGGTTTGTGTCTGGTGCACCAGTGTCAAAGATCATATCAAAATTGGAGGAAATTGCGAGAGTGGTCAGCTTCACTGTGAGGAAGAAAGATTGCAGAGTAAGCTTGGAGGGATCAAAAGAAGGCGTAAAGGGGCCATTGACAATTGCTGCAGAGATATTTGAACTAACACCTTCTTTGGTGGTGTTGGAGGTGAAGAAAAAAGCAGGGGATAAAGCAGAATATGATCAATTCTGTAACACTGAATTGAGACCCGGGTTGCAGAATTTGATGAGAGAGGAACCTGCCACTTCTTCTTCACAAACACCTAGTACAGATCCTGAACCGCCTCAACAACTACCTGTGGATATTGATTCTCCACATTACATACCTTCAGATACCGAATAA 1482 0.4602 MADAASNKPSGSGANKKVGANTLLLGRFEVGKLLGHGNFAKVYHARNVKSGEGVAIKVIDKEKILKSGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEESARKYFQQLISAVSFCHARGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDVWACGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPKWFTPDLTRLVTRLLDTNPETRISIPEIMENRWFKKGFKQIKFYVEDDKLCNIDDKMDKFDDIESMSDNSVSESDSELETRRRKASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIARVVSFTVRKKDCRVSLEGSKEGVKGPLTIAAEIFELTPSLVVLEVKKKAGDKAEYDQFCNTELRPGLQNLMREEPATSSSQTPSTDPEPPQQLPVDIDSPHYIPSDTE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1999 493 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 452 - -
Acco06g1999 493 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1999 493 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1999 493 SUPERFAMILY Protein kinase-like (PK-like) 24 283 IPR011009 -
Acco06g1999 493 FunFam Non-specific serine/threonine protein kinase 338 456 - -
Acco06g1999 493 CDD STKc_SnRK3 27 281 - -
Acco06g1999 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Acco06g1999 493 ProSiteProfiles NAF domain profile. 336 360 IPR018451 GO:0007165
Acco06g1999 493 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1999 493 Gene3D Transferase(Phosphotransferase) domain 1 20 337 - -
Acco06g1999 493 FunFam Non-specific serine/threonine protein kinase 20 107 - -
Acco06g1999 493 MobiDBLite consensus disorder prediction 457 471 - -
Acco06g1999 493 CDD CIPK_C 342 453 - -
Acco06g1999 493 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Acco06g1999 493 Pfam NAF domain 338 394 IPR004041 GO:0007165
Acco06g1999 493 Gene3D Kinase associated domain 1, KA1 338 457 - -
Acco06g1999 493 FunFam Non-specific serine/threonine protein kinase 18 331 - -
Acco06g1999 493 MobiDBLite consensus disorder prediction 451 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1999 Acco-ChrAcco06 15007019 15008500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1999 21 493 CBL-interacting serine-threonine protein kinases AT4G18700 77.500 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco06g1999 Pkinase 6.3e-74 CL0016