Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1991 ATGTCCCTTGTGAAATGTAATGCTATCTGTTTTTCATTAATGCTTTATCTTGATTCTCTTTTATTTATGCTATTGCCATGCAAACTATTTTCTGGTTATGCCAAGGATTTTTCTTTCATTTCTCTCGTTTTTGCCCAACATGGATGCTTCATTACTCTCGAGGCGGTACAAAGAAATTCCAAAAGGGGTTGGTTGCTTTTTAACGCAAAGCAAAGCAAAAGTAACTGGAAGCTCAGCAGTGAAGATCCCAGTAAAAAAGTTTCAGGCTTTTTCGGGCCTCTGCTTGATTTGATTTCTTGTTTCATGGAAGATGTGAAAAGGGTTGTTTGTTTCGTCTTCTTTCTCTGGAATTGGTTGGCTGCTGCTGCTGACACCAACAGTCTTCTTTCTCCAAAGGGTCTGAACTATGAAGTTGCTGCTTTGATGTCAATGAAGAATAAAATGAAAGACGAGCTGCGAGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTTGGTTGCTCTGCTGAGGGCTATGTTATTTCCCTCGACATGGCCAGTATGGGTTTATCTGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAATTATCTGGACCCGTTCCAGCTGAGATAGGAAAGCTTTTGGTGCTTCAGACTCTTGACCTTTCTGGCAACCAGTTTGATGGTGAAATCCCTAGTTCTCTGGGCTTTTTGACTAATCTTAGCTACTTGCGGCTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAGCTCGTTGCAAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCATTCCAAAAATTTTAGCAAAAGGGTACAGTATTTCAGGAAACAACTTCCTCTGTGCATCTTCATCAGCACAAATTTGTATGGGCGTTTCAAATCCACTAAATGGAACTGGTTCATCACTGGAAGTCGGTCGTCATCACCATCGGGTGCTTTCTGTTGCCATTGGCATTAGTTGTACATTTCTAATATCAGTAATGCTGCTTATCTACTGTGTACATTGGTACAGATCGCGCATCTTGTATACATCTTATGTGAAGGAAGATTGTGAATTTGACATTGGTCATTTGAGGAGGTTTTCCTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCGAAAAATATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGAAGTCTTCCAAATAAAATAACAGTGGCAGTGAAGAGGCTTAAAGATCCCAATTACACCGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTACATCGGAATCTCCTGCGTCTCTGTGGATTTTGTATGACATCTGATGAGAGGCTACTTGTGTACCCATACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGACATTTGCCGTGAAAAGCCATCGTTAGACTGGAATAGGCGAATGCGTATTGCTCTTGGGGCAGCTCGTGGGCTTCTATATTTACATGAGCAGTGTAATCCAAAAATTATCCACAGGGACGTTAAGGCTGCAAACATTTTGTTGGATGAAAGTTTTGAAGCTGTGGTGGGTGATTTTGGTCTTGCTAAGCTCTTGGATCAAAGAGATTCGCATGTCACTACTGCAGTTCGAGGCACAGTAGGACACATTGCCCCTGAATATCTCTCTACCGGGCAGTCTTCTGAAAAAACTGACGTTTTCGGATTTGGCATTTTACTTTTGGAGCTCATTACAGGGCAGAAGACTTTGGATGCTGGAAATGGTCAAATTCAGAAGGGAATGATTCTTGATTGGGTTAAAACGTTATTTGAGGAAAAGCGACTGGAAGTTCTAGTTGATAGGGATCTGAGGGGACGTTTTGATCCAATAGAGTTGGAACAGGCAGTGAAGTTGTCTTTACAATGTACTCAATCACGTCCCAGCCTCCGGCCAAAGATGTCAGAAATCTTAAGGATCCTGGAAGGCCTAGTGGGACAGGAGCAGCCGGAGGACGAATCACACGGTGGAGGTAACCTTTATGACGAAAGAAACTGCAGTTTCTCCAGAAATTACAGTGATGGGCATGATGAACCTTCATTTATTATTGAAGCCATCGAGCTTTCCGGACCCCGGTGA 2166 0.4257 MSLVKCNAICFSLMLYLDSLLFMLLPCKLFSGYAKDFSFISLVFAQHGCFITLEAVQRNSKRGWLLFNAKQSKSNWKLSSEDPSKKVSGFFGPLLDLISCFMEDVKRVVCFVFFLWNWLAAAADTNSLLSPKGLNYEVAALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMGLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLVLQTLDLSGNQFDGEIPSSLGFLTNLSYLRLSRNKLSGQIPQLVANLTGLSFLDLSFNNLSGPIPKILAKGYSISGNNFLCASSSAQICMGVSNPLNGTGSSLEVGRHHHRVLSVAIGISCTFLISVMLLIYCVHWYRSRILYTSYVKEDCEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGSLPNKITVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLCGFCMTSDERLLVYPYMPNGSVADRLRDICREKPSLDWNRRMRIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKTLDAGNGQIQKGMILDWVKTLFEEKRLEVLVDRDLRGRFDPIELEQAVKLSLQCTQSRPSLRPKMSEILRILEGLVGQEQPEDESHGGGNLYDERNCSFSRNYSDGHDEPSFIIEAIELSGPR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1991 721 FunFam Somatic embryogenesis receptor-like kinase 1 474 685 - -
Acco06g1991 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Acco06g1991 721 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Acco06g1991 721 FunFam Putative LRR receptor-like serine/threonine-protein kinase 134 316 - -
Acco06g1991 721 Gene3D Transferase(Phosphotransferase) domain 1 474 682 - -
Acco06g1991 721 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 111 669 - -
Acco06g1991 721 FunFam Somatic embryogenesis receptor kinase 1 368 473 - -
Acco06g1991 721 Gene3D Ribonuclease Inhibitor 134 316 IPR032675 -
Acco06g1991 721 Gene3D Phosphorylase Kinase; domain 1 368 473 - -
Acco06g1991 721 SUPERFAMILY L domain-like 136 305 - -
Acco06g1991 721 SMART serkin_6 398 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1991 721 SUPERFAMILY Protein kinase-like (PK-like) 382 671 IPR011009 -
Acco06g1991 721 ProSiteProfiles Protein kinase domain profile. 398 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1991 721 Pfam Leucine rich repeat N-terminal domain 135 174 IPR013210 -
Acco06g1991 721 Pfam Protein kinase domain 401 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1991 Acco-ChrAcco06 14920665 14925207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1991 142 721 Receptor kinase-like Gene Family AT5G45780 72.289 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Acco06g1991 Pkinase 2.2e-43 CL0016