Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1990 ATGGATCAGGCAAGGAAGCCAGGGAGTGATGAGGTATCCGATCTCGTTGATGAAGGGACAGGACAGAAAACAACTGATTCGGTTGAAGGGTCTGCTGATGGAGTAGCTGGGGGCAACTTGAGTGGAGCTATCAAAAGTGGAGATGTGACTTCAGAAGAGATGAGTAATGATCCGGGACTGAATAAGAAACTACATGAGGCGCCTGCGGGAGCTATGGATCAGGGCATGCGTGATCAGCAAAATACCAGTGATGCATTCCCCGTAGTTGATCAAGGAGCAAGTTATAATTCAAGGAATTTGCATAACAGGGCTGTACTTGAGTCCGTGGTTGTAATAGATTCTGCTGAGACAGAGGGTGTGAATGGAGATAATAGGAAGTTGGAAGCCAGGGTCAATGAATCGGAGTTGAACAAGGCATCCATGAAATCACCAAAACGGCCGTCTGAGGTGGATAAAAATTCATATGTGATCAATATAAAGTCTGGTAGCTGCAGAGAGTTTAACGAGAATGTGGAGGGTGAAAGGATTTGTAGGATTTGCCATCTTGCTTCTGGGCAACCATCAGATTCAGCAGCTGCTAGCCCTACAAACAGTGCTTCTAATGGAGATTTACTTCAGCTTGGTTGTGCGTGTAAAGATGATCTGGGTATTGCGCACAGCCATTGTGCTGAGGCATGGTTCAAGCTAAAAGGAAACAGATTGTGTGAAATATGCGGTGAAACTGCCAAAAATGTTTCGGGTGTTACTGATCATGGATTTATGGAAGAGTGGAATGAAAGAACATTCATTGACAACCATAGCACCTCATCATCTGGCATGTGTTGTGGATGCTGGCGTGGACAGCCATTTTGTAACTTCTTGATGGCTTGCCTGGTGATAGCTTTTGTTCTGCCATGGTTTTTCCGTGTAAATATGTTCTGA 921 0.4495 MDQARKPGSDEVSDLVDEGTGQKTTDSVEGSADGVAGGNLSGAIKSGDVTSEEMSNDPGLNKKLHEAPAGAMDQGMRDQQNTSDAFPVVDQGASYNSRNLHNRAVLESVVVIDSAETEGVNGDNRKLEARVNESELNKASMKSPKRPSEVDKNSYVINIKSGSCREFNENVEGERICRICHLASGQPSDSAAASPTNSASNGDLLQLGCACKDDLGIAHSHCAEAWFKLKGNRLCEICGETAKNVSGVTDHGFMEEWNERTFIDNHSTSSSGMCCGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1990 306 ProSiteProfiles Zinc finger RING-CH-type profile. 169 245 IPR011016 GO:0008270
Acco06g1990 306 SMART ringv_2 176 239 IPR011016 GO:0008270
Acco06g1990 306 MobiDBLite consensus disorder prediction 1 65 - -
Acco06g1990 306 MobiDBLite consensus disorder prediction 1 17 - -
Acco06g1990 306 SUPERFAMILY RING/U-box 174 241 - -
Acco06g1990 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 249 IPR013083 -
Acco06g1990 306 Pfam RING-variant domain 177 238 IPR011016 GO:0008270
Acco06g1990 306 PANTHER ZINC FINGER, RING-CH-TYPE 57 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1990 Acco-ChrAcco06 14912344 14915378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1990 108 305 C3H Transcription Factor Family AT5G05830 36.634 6.06e-32 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g1990 06 14912344 14915378 Acco06g1990 06 14912344 14915378 ECH