Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1974 ATGGATAGTAGGTTCAACAACACCAACCTCAATATCAGTGAACAAGATGACACTGATATAACTCAAGAAAACGCTGCAGAGTCCCCTCCCTCCGCTGTCTTTAATATCGATAACTTCGTCCCTTCTACGTCTTCCCCTAAAAGAAGGCGAGCAATACAGAAGCGGGTTGTGCAAATTCCAATCAAAGAAGTTGAAGGATCTCGGCTTAAAGGAGAGAGCAATACTCCACCATCTGATTCCTGGGCTTGGAGAAAGTATGGACAAAAACCCATCAAAGGTTCCCCCTACCCCAGAGGATACTATCGATGCAGCAGTTCCAAAGGATGCCCTGCAAGAAAACAAGTGGAAAGGAGCCACATGGACCCCACCATGATCGTCGTGACCTACTCTTGCGAGCACAATCACCCTTGGCCGGCTTCTCGGAATCATCACCACCACCACAAATCCGCCTCCAACAACAAAGCAATCGTCCCAGCCGAACCTGTCGCCGCGGCCGGGGTCGAGCAGGAAACGGAGTCTAAGGAGAAGTTCGCGGAGCTCGGGGACGGGCCATTGATGAGCACAGCGGACGATGAGCTTGGGTGGTTCGGTGAAATGGAGAGGACGGCAACGACGTCGTCGGCTGTTCTGGAGAGCACAATTCTGACCGGAGACGACACCGACGTGGCCTCAATGTTCCTGCCGATGAGGGAGGAGGACGAGTCTCTATTTGCAGACCTGGGGGAGCTTCCGGAGTGCTCGGTGGTGTTCCGGCGAGTGGGAATGGAAAGAGAGGAGGAGAGACGGCGGCGGCGTGCAGCGGCGTGGTGTGGGACCACAAGTTGA 825 0.5418 MDSRFNNTNLNISEQDDTDITQENAAESPPSAVFNIDNFVPSTSSPKRRRAIQKRVVQIPIKEVEGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSHMDPTMIVVTYSCEHNHPWPASRNHHHHHKSASNNKAIVPAEPVAAAGVEQETESKEKFAELGDGPLMSTADDELGWFGEMERTATTSSAVLESTILTGDDTDVASMFLPMREEDESLFADLGELPECSVVFRRVGMEREEERRRRRAAAWCGTTS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1974 274 FunFam WRKY transcription factor 65 58 138 - -
Acco06g1974 274 SMART WRKY_cls 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1974 274 Pfam WRKY DNA -binding domain 79 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1974 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 248 IPR044810 GO:0003700
Acco06g1974 274 MobiDBLite consensus disorder prediction 1 47 - -
Acco06g1974 274 MobiDBLite consensus disorder prediction 1 52 - -
Acco06g1974 274 ProSiteProfiles WRKY domain profile. 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1974 274 Gene3D WRKY domain 67 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1974 274 SUPERFAMILY WRKY DNA-binding domain 75 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1974 Acco-ChrAcco06 14813467 14814784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1974 16 251 WRKY Transcription Factor Family AT1G29280 54.918 1.43e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g1974 WRKY 2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g1974 06 14813467 14814784 Acco06g1974 06 14813467 14814784 ECH