Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1955 ATGAAGACTGTAAACTTCTTTGAGCTCTTACTTGTGGCATTAATTTGTTTCCAGTTGCTGGGAATTTCTCATGAGTCAAAGTTACCTCAAGATGAAGTTCATGCTCTTCAAGAAATTACAAGAACAATGGGGGCAAAGAATTGGAAGTTTAGTGAATCCTGCGGAATTGATACAGTTGGAGTAACACAGGAACTCTCTCCTGTATCAGAGAGAAGACTGGTTTGTGACTGCCTATTTGATAACAACACAGTCTGCCATGTTGTGAAGATGACTCTCAAGGGCCTTAGCCTCCCTGGCATGCTTCCACCTCAACTGGTCCGGCTACCCTATCTTCGAGAAATAGATTTTGCTTACAATCTCTTTACTGGTACTATTCCAAACGAATGGGCTTCGATGAATCTAACTTCAATGATGCTTGAAGCAAACCAATTTTCTGGTGTCATTCCTCCTGAGCTTGGGAGACTAATCAACTTGCGGGTGTTTAGGATAAATGATAACAACTTCAATGGGACCATACCTAACTTTATTCAGAACTGGAAGCTTCTCGAAAGACTGAGAATCAGTGACATCGATTGTCCTAGTCAAGGTTTTCCTTTACTGGAAAACATGCCAAACATGGAAACTTTAGTTCTGAGGAACTGTAACCTTACTGGTGAGATACCTTCATACGTCTGGACAATGACGAAGTTGATAACATTGTACCTTACAGGAAATATGCTAAGTGGAAATGTACCAGAAATTTCGAATGGTGGAAGTAGCATGGAGTCATGGGTAATCCATGTGATACTGAAGGAGTATGGTTCTTTTCCTGTTACAAAGTACAATCCAGCTCTAGGAGTAGACTTTTCACTTCATATGTGTTTGTCAATTGGTATGGAGTTGGGACTGAACTTCATGAAAAGAGCTATTAGTGTAGAGTGCAACTTGAGTCCTAGAATGAAAAGCCAAGGGTATGTCATAAGTTGGAGTGTTCTAGAGTGCAATTGTCAAGCACATTGGTTCATTAAAGGTGGTGCTATAGTGGAATCTCACATAAGGAACTTGTATCTGAATTTGTTCAGAAGCTTTAGAAAGAAGAACAAATTGCGCATATTCAATATCTATGTTCAGGAACAATTAATTCGGAAGGATTTTAATATTGAGAGAACAACTAGAATTCCTGATATAGGAGTTTATGGTCCCATAGTGTCAGCATTGTCTATTGTTTCTGATTCAAGACGTTGCCCAAATGGTGGAAAGAATAGTGCGGTTAGTAAGTTTATTGCAATTGGAATCGCTGCTCTATGCATAGTGCTTTTTATGGCAGGGATCATTTGGTGGAAAGACTGTTTCAGAGGAAACCTTCAAAAGACAGAAGTAGATATTCAGACAGGAACTTTCAGCATCAAACTGATGAGAGCGGCCACTAATGACTTCTCTTATGATAACAAAATTGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGTCAGTTACCTGATGGTACTGTTATAGCAGTCAAGCAGCTATCATCAATGTCGCGGCAGGGAAATCGTGAATTTCTAAATGAAATAGGTCTAATATCTTGTTTGCATCATCCTAACCTTGTGAAACTCTATGGATCTTGCATTGAAGGGGATCAGCTACTAGTGGTATATGAATACATGGAAAATAATAACCTCGCTCGTGCTTTATTTGGCAATGAAAACAATCAGATTCATCTGGATTGGCCCACAAGAGTTAGGATCTGCATTGGCGTTGCAAAAGGTCTCGCATTCCTTCATGAAGAGTCAAGGCTAAAGATTGTGCATAGAGATATCAAGGCTACTAATGTGTTACTCGATGGCAATTTGAATCCTAAAATATCGGATTTTGGTTTGGCCAAGCTCAATGAAGGAGAGAAGACGCACATGACAACTCGAGTTGCGGGAACTATAGGATATATGGCTCCAGAATATGCATTATGGGGCCATCTAACATATAAGGCAGATGTTTACAGTTTTGGTGTCTTAGCGTTAGAAATTGTTACTGGGAAAAGCAATAACAATTATTTGCCAGATAATGGCGCTGTTTGTCTTCTGGAGTGGGCATGTCAGCTGCAACAAAGTGGTAAGTTAATGGGGCTGGTAGATGAGAGAATAGGGTCAAACGTTAATGAAAGCGAAGCAGAGAAAGTGCTGAAAGTAGCTCTTCTGTGCACAAATGCATCACCATCAATTAGGCCGACAATGTCCGAGGTTGTAAATATGCTTGAAGGAAAGATGGAGATCCCAAATGTAGTTCCAGAACCAGGTGCTTACAATGAAGATGTGAGGTTTAAAGTCTTGAGAGATCTTGACAAATGGTCGAGGCAGAGTTTGAATGGAAGCCAGATTCAATCTTCTTCAGCTTCACTACACACCTTCAGCTTAGAATCTGGCAATACTTCAACTGGTTGTTCTTTGGATAATCAGTTAGTCCACAAAACTGAGATTTCACCTTCAAAGGCAAGTTCAACACCACCCTGA 2484 0.403 MKTVNFFELLLVALICFQLLGISHESKLPQDEVHALQEITRTMGAKNWKFSESCGIDTVGVTQELSPVSERRLVCDCLFDNNTVCHVVKMTLKGLSLPGMLPPQLVRLPYLREIDFAYNLFTGTIPNEWASMNLTSMMLEANQFSGVIPPELGRLINLRVFRINDNNFNGTIPNFIQNWKLLERLRISDIDCPSQGFPLLENMPNMETLVLRNCNLTGEIPSYVWTMTKLITLYLTGNMLSGNVPEISNGGSSMESWVIHVILKEYGSFPVTKYNPALGVDFSLHMCLSIGMELGLNFMKRAISVECNLSPRMKSQGYVISWSVLECNCQAHWFIKGGAIVESHIRNLYLNLFRSFRKKNKLRIFNIYVQEQLIRKDFNIERTTRIPDIGVYGPIVSALSIVSDSRRCPNGGKNSAVSKFIAIGIAALCIVLFMAGIIWWKDCFRGNLQKTEVDIQTGTFSIKLMRAATNDFSYDNKIGEGGFGPVYKGQLPDGTVIAVKQLSSMSRQGNREFLNEIGLISCLHHPNLVKLYGSCIEGDQLLVVYEYMENNNLARALFGNENNQIHLDWPTRVRICIGVAKGLAFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLAKLNEGEKTHMTTRVAGTIGYMAPEYALWGHLTYKADVYSFGVLALEIVTGKSNNNYLPDNGAVCLLEWACQLQQSGKLMGLVDERIGSNVNESEAEKVLKVALLCTNASPSIRPTMSEVVNMLEGKMEIPNVVPEPGAYNEDVRFKVLRDLDKWSRQSLNGSQIQSSSASLHTFSLESGNTSTGCSLDNQLVHKTEISPSKASSTPP 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1955 827 SUPERFAMILY L domain-like 83 247 - -
Acco06g1955 827 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 443 547 - -
Acco06g1955 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Acco06g1955 827 MobiDBLite consensus disorder prediction 805 827 - -
Acco06g1955 827 Gene3D Ribonuclease Inhibitor 196 255 IPR032675 -
Acco06g1955 827 Pfam Protein tyrosine and serine/threonine kinase 474 743 IPR001245 GO:0004672|GO:0006468
Acco06g1955 827 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 133 776 - -
Acco06g1955 827 Gene3D Transferase(Phosphotransferase) domain 1 548 752 - -
Acco06g1955 827 ProSiteProfiles Protein kinase domain profile. 472 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1955 827 SMART serkin_6 472 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1955 827 SUPERFAMILY Protein kinase-like (PK-like) 454 744 IPR011009 -
Acco06g1955 827 Gene3D Ribonuclease Inhibitor 31 195 IPR032675 -
Acco06g1955 827 CDD STKc_IRAK 478 745 - -
Acco06g1955 827 Gene3D Phosphorylase Kinase; domain 1 443 547 - -
Acco06g1955 827 FunFam Putative LRR receptor-like serine/threonine-protein kinase 548 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1955 Acco-ChrAcco06 14654822 14666324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1955 336 824 Receptor kinase-like Gene Family AT1G53430 48.302 4.09e-148 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco06g1955 PK_Tyr_Ser-Thr 5.7e-49 CL0016