Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1941 ATGAAGCCAGGGAACAATTATAACAGCAGTCATACTCCTTCTACACCCACATCAAGATTAGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAATCCAACAGGAATTCTCAACCAGTTGAGGAGACAAAAGACAGCAACAAAGAGCTTGAACTCCATAGTGACTTGTGTTCAATCGGCGAGAATGACATTCGTGAGGAAGATTTATTTGAAAAGCAGGATGCAGATGCAAGATTGGCAGAAAGATTTCAGAGGCAAGATGAACAGTCAACCAAACAACGCTTACTGGTCGTGGCCAATAGGTTGCCTGTGTCTGCGACTAGAAAGGGTGTGGATTCATGGCAACTTGAGATCAGCGCAGGAGGTCTAGTCAGTGCAATTTTAGGTGTGAGGGAGTTTGACACTAGGTGGATTGGGTGGGCTGGAGTGAATGTGCCAGATGAAGTTGGCCAGAACACATTGACTAAAGCTTTAGCTGAAAAGAGATGCATACCAATATTTCTCGACGAGGAAATAGTTCATCAATATTACAACGGCTACTGCAACAATGTCTTATGGCCTCTTTTTCATTACCTTGGACTTCCACAGGAGGACCGACTAGACACGACTCGTAGTTTCCAATCTCAATTTGATGCATATAAGATAGCAAACCAAATGTTTGCTGATGTGGTTTATAAGCATTATGAGGAAGGTGATGTCGTTTGGTGCCAAGATTACCACCTAATGTTTCTTCCAAAATGTTTAAAAGAACGTGATGCGAAAATGAAAGTTGGTTGGTTTCTCCACACGCCCTTTCCTTCCTCAGAAATACATAGGACACTGCCATCAAGAACTGAACTATTGAGATCTGTACTTGCTGCTGACTTGGTGGGGTTTCATACATATGATTATGCAAGGCATTTTGTCAGTGCCTGTACTCGAATTCTTGGGCTTGAGGGTACACCTGAAGGAGTAGAAGATCATGGGAGGCTGATTCGTGTAGCTGCATTTCCTATTGGGATCGACTCTGAACGATTTATCCGAGCCCTTGAACTCCCTCAAGTCCAGGATCACATTAAAGAATTGAAAGAAAAATTTGCAGGCCGTAAGGTAATGCTGGGTGTTGATCGTCTTGATATGATAAAAGGAATCCCCCAGAAAATCTTGGCATTTGAGAAATTCCTTGAGGAGAATCCTGACTGGCGTGATAAAGTAGTCTTGATACAAATTGCTGTTCCTACAAGAACTGATGTTCCTAAATACCAAGAGCTTACAAGCCATGTGCATGAGATTGTTGCACGCATTAATGGAAGATTTGGAACACTTACTGCTGTTCCAATACATCACCTGGATCGATCACTTGACTTTCATGCATTATGTGCACTGTATGCTGTTACTGATGTAGCACTCGTGACATCTTTAAGGGATGGAATGAACCTTGTGAGCTATGAGTATGTTGCTTGCCAAGCTTCTAAGAAGGGAGTTCTAATTCTAAGTGAGTTTGCAGGGGCAGCACAGTCTCTTGGCGCGGGAGCTGTGTTGGTAAATCCATGGAATATCACAGAGGTTTCTGCCTCTATTGCTTATGCCTTGAACATGCCTGCTGATGAAAGAGAGAAGCGCCATCAGTTCAACTTCAAGCACGTCACTACTCACACCTCTCTCGAGTGGGCTGCAACTTTCGTCAGTGAACTGAATGACACCATTGTTGAAGCTCAGCTTAGGACGAGACAAATTCCACCGCCACTTCCTAATGAAGTTGCAGTTAATCGTTACTCAAAAGCCAATAATCGATTGATCATTCTGGGCTTCAATGCCACTTTAACTGAACCAGTGGATAGCCTAGGAAATGCTGGCCAAATTAGAGAACTGGAGCTTAAATTGAACCCAAATGTAAAAGATGCTTTAAAGAAGTTATGTGATGATCCGAAGACTACAATAGTTGTACTTAGTGGGAGTGATCGAGGTGTCCTTGACAAAAACTTCAGCGAGTACAACATGTGGCTGGCTGCAGAAAATGGAATGTTTCTACGTCCTACTACTGGTGAATGGATGACAACCATGTCTGAAATTTTAAACATGGATTGGGTTCATAGTGTGCAGCAAGTTTTCGAGTACTTCACTGAAAGAACTCCTCGAACTCATTTCGATTTGCGCGAGACTTCAATTATATGGAATTACAAGTACGCGGATGTTGAGTTTGGAAGACTTCAAGCAAGAGATCTCCTTCAGCATCTTTGCACAGGCCCAATATCAAATGCTTCACTTGAAGTTGTCCAAGGCGGTAAATCGGTTGAGATTCGAGCTGCTGGTGTCTCAAAGGGAGCGGCAATTGATCGGATTCTCGGAGAGATAGTTCATCAGAAGGGCATGAAGGAACCCATTGATTATGTTCTCTGTGTTGGACACTTTCTGCCAAAGGATGAAGATGTTTATACATTTTTTGAGCCAGATCTTCCTCTTGGATCCCCAACAATAGCAAGAGCTATGTTATCCAGCTCTAACAAGCCATCTCTACCAAAGTTCTCAACTAGCAAGGGTGGGTCTAAGGCAGCTCGACTCAAGAAGCAATTGTCGTTGTCAACTTTAGAAAAGAGAAAAAAGGATGGGATTCCATTGCAGCCAATACATCGTGATAGAGTATCAATGCAAGAGGGTTTTTCCGTGTTGGATCTCAAAGGTGATAATTACTTTTCTGGTAGTGTTGCACGAAAGAGATCAAGAGCACGATATCTTCTTAAAACTTCAGATCATGTCATCGAACTCTTGAAGAAGTTGGCAGGCAATACATCATCATTATCAATTTGA 2784 0.4267 MKPGNNYNSSHTPSTPTSRLERLLRERELRKSNRNSQPVEETKDSNKELELHSDLCSIGENDIREEDLFEKQDADARLAERFQRQDEQSTKQRLLVVANRLPVSATRKGVDSWQLEISAGGLVSAILGVREFDTRWIGWAGVNVPDEVGQNTLTKALAEKRCIPIFLDEEIVHQYYNGYCNNVLWPLFHYLGLPQEDRLDTTRSFQSQFDAYKIANQMFADVVYKHYEEGDVVWCQDYHLMFLPKCLKERDAKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGRLIRVAAFPIGIDSERFIRALELPQVQDHIKELKEKFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLIQIAVPTRTDVPKYQELTSHVHEIVARINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQASKKGVLILSEFAGAAQSLGAGAVLVNPWNITEVSASIAYALNMPADEREKRHQFNFKHVTTHTSLEWAATFVSELNDTIVEAQLRTRQIPPPLPNEVAVNRYSKANNRLIILGFNATLTEPVDSLGNAGQIRELELKLNPNVKDALKKLCDDPKTTIVVLSGSDRGVLDKNFSEYNMWLAAENGMFLRPTTGEWMTTMSEILNMDWVHSVQQVFEYFTERTPRTHFDLRETSIIWNYKYADVEFGRLQARDLLQHLCTGPISNASLEVVQGGKSVEIRAAGVSKGAAIDRILGEIVHQKGMKEPIDYVLCVGHFLPKDEDVYTFFEPDLPLGSPTIARAMLSSSNKPSLPKFSTSKGGSKAARLKKQLSLSTLEKRKKDGIPLQPIHRDRVSMQEGFSVLDLKGDNYFSGSVARKRSRARYLLKTSDHVIELLKKLAGNTSSLSI 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1941 927 Gene3D Glycogen Phosphorylase B; 84 339 - -
Acco06g1941 927 Gene3D Glycogen Phosphorylase B; 340 542 - -
Acco06g1941 927 Pfam Trehalose-phosphatase 619 831 IPR003337 GO:0003824|GO:0005992
Acco06g1941 927 SUPERFAMILY HAD-like 590 778 IPR036412 -
Acco06g1941 927 MobiDBLite consensus disorder prediction 1 20 - -
Acco06g1941 927 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 85 339 - -
Acco06g1941 927 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 81 919 IPR001830 GO:0003824|GO:0005992
Acco06g1941 927 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 682 762 - -
Acco06g1941 927 MobiDBLite consensus disorder prediction 1 19 - -
Acco06g1941 927 FunFam Alpha,alpha-trehalose-phosphate synthase 616 685 - -
Acco06g1941 927 MobiDBLite consensus disorder prediction 27 48 - -
Acco06g1941 927 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 92 561 - -
Acco06g1941 927 CDD GT20_TPS 93 558 IPR001830 GO:0003824|GO:0005992
Acco06g1941 927 Gene3D - 618 776 IPR023214 -
Acco06g1941 927 Pfam Glycosyltransferase family 20 93 558 IPR001830 GO:0003824|GO:0005992
Acco06g1941 927 CDD HAD_TPP 591 826 - -
Acco06g1941 927 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 93 558 IPR012766 GO:0003825|GO:0005992
Acco06g1941 927 Gene3D - 682 762 - -
Acco06g1941 927 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 340 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1941 Acco-ChrAcco06 14474454 14481844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1941 3 924 Trehalose Biosynthesis Gene Families AT1G78580 71.203 0.0 1350