Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1917 ATGGCGGAAGGGCCGACAGATTCCTCGGGCAAGCAGAAAGTTCCCTTTCATAAGCTATTTACTTTTGCCGACCGTCGCGATGTCGTTTTGATGGCCATCGGTACGATCTGTGCGGTGGCCAATGGGGTATCACAGCCTCTCATGACACTGATTTTCGGCAAGGTCATCAACACTTTTGGTTCGACCGCTCAATCACGCATTGTGCATGAAGTTTCCAAGGTTGCATTACTATTCGTTTACCTGGCCATTGGTACTGGCGTTGCTTCATGTCTCCAGGTGGCTAGTTGGATGGTGACAGGGGAAAGGCAAGCCGCAAGGATCCGTGGTTTGTACTTGAAAACAATACTAAGACAGGATATTGCCTTCTTTGACACTGAAACAACCACAGGGGAGGTCATTGGTAGGATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTTTGCAACTAGCTGCAACTTTTGTTGGTGGGTTTGTGGTTGCCTTTACAAGAGGATGGCTACTTTCTCTGGTTTTGCTCTCATGTCTTCCACTTGTTGTCTTTGCTGGTGGAATCACGTCAATGTTTGTGGCAAAAATGTCAAGTCGTGGACAAGTTGCTTACGCAGAAGCAGGAAATGTGGTTGAACAAACTGTTGGGGCCATTAGAACAGTTGCATCTTTCACTGGGGAGAAGAAAGCAGTAGAAAACTATAATAGCAAGTTGAAAGTTGCCTATAAATCAATGGTTAAACAAGGGATGGCCACTGGGCTTGGATTTGGACTTGTTTTGTTCGTCATCTTCAGCACCTACGGACTTGCCATGTGGTATGGAGCCAAACTGATCCGTGACGGAGGAGGGTATGATGGTGGAGCTGTCCTCACTATAATGATGGCGCTGATGATGGGTGGAATGTCACTGGGACAGACATCACCAAGTCTTAATTCATTTGCAGCAGGTCAAGCCGCTGCATACAAGATGTTTGAGACGATTAAAAGAAGACCGAAAATTGATGCTTATGACACTAATGGGGTTGTATTGGAGGACGTCAAGGGAGATATTGAACTCAAAGATGTTTATTTCAGATACCCTGCTAGGCCTGACGTACAGGTTTTTGCTGGATTCTCACTGTGTGTTCCAAGCGGCACAACTACTGCTTTAGTGGGTCAAAGTGGAAGCGGAAAGTCAACTGTAGTTAGCTTGTTAGAAAGATTCTATGACCCTGATGCTGGTGAAGTACTAATAGATGGTGTTAATTTGAGGGACTTTAAACTTAGATGGATAAGAGAAAAGATTGGGCTTGTTAGTCAGGAGCCGATGTTATTTATAGGTACCATAAAAGAAAATATAGCATATGGTAAGGATAATGCAACTGATGAGGAAATAATTACAGCGACAAAGCTTGCCAATGCTGCAAAATTTATTGACAAAATGCCAAAGGGCCTTGATACCTTGGTAGGGGAGCATGGAACTCAAATTTCTGGGGGACAAAAGCAACGGATTGCCATTGCAAGGGCAATTCTGAAGAACCCTAAAATCCTCCTTCTTGATGAAGCCACAAGCGCACTAGATGCTGAGTCTGAACGCATTGTTCAAGACGCATTGGTAAATGTCATGTTAAACAGGACTACCGTGATTGTTGCTCATCGTTTGACAACTATTAGAAATGCTGATGAGATAGCAGTGGTGAATCAAGGGAAAATAGTGGAAAAAGGAACTCACGACGAGTTAATCCAGAATCCTGATGGTGCTTATTCTCAGCTTGTTCGTCTCCAAGAAGGCTCTGATGACGCTGAAGAAGGAGAAAAATCTGAAACAGATAAGGCCACTACCAGTTATACAGTCAGAAACATGTCTTCCTCTGAGACCCGAAAATCATCGTTGAGAATAATTAGCAGAGGTTCATCAGGAAGGAAATCTTCTCGCTCGCTCAACCTTGGTCTTTCTGATCGAACTAATCCATGTCGTTCTCTAGAAGGCGATGGTGATCTTGAAAAGACCGAAACTGCTGATGTCAAGCGAAAAGAGGTTTCCATTATGCGTCTGGCCTGTTTGAACAAACCGGAGATTCCTGTGTTATTGCTTGGATCTGTTGCTGCTGTAATCCATGGCCTAATTTTCCCTATATTTGGCCTCTTACTTTCATCAGCTATCAAAACGTTATATAAACCACCAGAGCAAATGAAAAAAGAATCCAAGTTTTGGGCAGTTCTCTATGTGATTTTGGGATTGACTGCTTTCGTGTCTCTACCATTACAAAATTACTTCTTTGGAGTTGCTGGTGGAAAATTAATAGAACGAATTCGTTCCTTGACATTTGAGAAGATTGTGCACCAAGAAATTAGTTGGTTCGATGATCCTGCAAATTCAAGCGGTGCAGTTGGTTCAAGGTTATCTACAGATGCTTCAACAGTGAGACGTCTTGTTGGTGACACCTTGGCCCTCGTTGTGCAGAACATAGCGACAGTAACAACAGGCCTCCTCATAGCATTTATAGCTAATTGGAGACTCACTTTAGTGATTCTTGCTGTGTCACCTTTCCTTCTTTTGCAAGGAGTATTTGCAACGAAATCTCTGAAAGGGTTTAGTGCAGATGCTAAGCTGATGTATGAAGAGGCCAGTCAGGTGGCAAATGATGCAGTTAGTAGCATCAGGACTGTTGCATCATTCTGTGCTGAACCAAAGGTCATGGAAATGTATAGGAAGAAAATTGAAGGGCCAGAAAAAGAAGGCATTCGAAGAGGATTTGTTAGTGGTGCAGGTTTTGGTTTCTCTTTCTTTGCTTTGTACTGCGCAAATGCCCTGTGTTTCTACGTGGGAGCCATCTTTATAAAGCAAGGGGTAGCAAATTTTGGAGAGGTTTTCAAGGTTTTCTTTGCTTTAACAATTACAGCATTAGGGGTTTCCCAGGCCAGTGGCTTGGCCCCAGACACCAACAAGGCTAAGGACTCCGCAGCTTCAATATTTGAAATTCTGGACAGTAAACCCAATATTGACTCCAGTAGCGATGAGGGCATGACATTAGATTCTGTAAACGGTGATATTGAATTAAGAAATGTCAGCTTCAAATATCCTACAAGGCCTGATGTTCAAATTTTCAGAGATTTGAACTTAACCATACCCTCTGGGAAGACTGTTGCAATGGTTGGAGAAAGTGGAAGTGGAAAATCTACAGTTATCAGCCTCATAGAGAGATTTTACGACCCGGATTCTGGACTCGTACTGCTAGATGGAACCGAAATCAAGAAGCTGAGGCTAAGCTGGCTGAGACAGCAAATGGGATTGGTCAGCCAAGAGCCGATTCTTTTCAATGAAACCATCCGACACAACATAGCTTATGGCAAAACAGGAGGCGCCAATGAGGAAGAGACAGTTGCAGCAGCTAAAGCAGCCAATGCATTCCAGTTCATAAGCTCACTTCCAAGTGGTTTTGACACTATGGTTGGCGAAAGAGGCACACAATTGTCAGGAGGCCAGAAGCAGAGGATTGCCATTGCAAGAGCAATGTTGAAAAACCCAAAAATCCTTTTGCTTGATGAGGCAACCAGTGCATTAGATGCAGAATCAGAGCGAGTGGTTCAAGAAGCTTTGGATAATGTTATGGTGAACAGAACCACAGTGGTGGTAGCTCATAAGCTCTCAACAATTAAAGGTGCTGATGTTATAGCAGTTGTGAAAAATGGAGTGATTGCTGAGAAGGGAAGGCATGAGGCCTTGGTCAAGATTGAAGGTGGTGTCTATGCTTCCTTGGTTGCTCTCCATATGAGTGCTTCATGA 3777 0.4363 MAEGPTDSSGKQKVPFHKLFTFADRRDVVLMAIGTICAVANGVSQPLMTLIFGKVINTFGSTAQSRIVHEVSKVALLFVYLAIGTGVASCLQVASWMVTGERQAARIRGLYLKTILRQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFLQLAATFVGGFVVAFTRGWLLSLVLLSCLPLVVFAGGITSMFVAKMSSRGQVAYAEAGNVVEQTVGAIRTVASFTGEKKAVENYNSKLKVAYKSMVKQGMATGLGFGLVLFVIFSTYGLAMWYGAKLIRDGGGYDGGAVLTIMMALMMGGMSLGQTSPSLNSFAAGQAAAYKMFETIKRRPKIDAYDTNGVVLEDVKGDIELKDVYFRYPARPDVQVFAGFSLCVPSGTTTALVGQSGSGKSTVVSLLERFYDPDAGEVLIDGVNLRDFKLRWIREKIGLVSQEPMLFIGTIKENIAYGKDNATDEEIITATKLANAAKFIDKMPKGLDTLVGEHGTQISGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVNVMLNRTTVIVAHRLTTIRNADEIAVVNQGKIVEKGTHDELIQNPDGAYSQLVRLQEGSDDAEEGEKSETDKATTSYTVRNMSSSETRKSSLRIISRGSSGRKSSRSLNLGLSDRTNPCRSLEGDGDLEKTETADVKRKEVSIMRLACLNKPEIPVLLLGSVAAVIHGLIFPIFGLLLSSAIKTLYKPPEQMKKESKFWAVLYVILGLTAFVSLPLQNYFFGVAGGKLIERIRSLTFEKIVHQEISWFDDPANSSGAVGSRLSTDASTVRRLVGDTLALVVQNIATVTTGLLIAFIANWRLTLVILAVSPFLLLQGVFATKSLKGFSADAKLMYEEASQVANDAVSSIRTVASFCAEPKVMEMYRKKIEGPEKEGIRRGFVSGAGFGFSFFALYCANALCFYVGAIFIKQGVANFGEVFKVFFALTITALGVSQASGLAPDTNKAKDSAASIFEILDSKPNIDSSSDEGMTLDSVNGDIELRNVSFKYPTRPDVQIFRDLNLTIPSGKTVAMVGESGSGKSTVISLIERFYDPDSGLVLLDGTEIKKLRLSWLRQQMGLVSQEPILFNETIRHNIAYGKTGGANEEETVAAAKAANAFQFISSLPSGFDTMVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERVVQEALDNVMVNRTTVVVAHKLSTIKGADVIAVVKNGVIAEKGRHEALVKIEGGVYASLVALHMSAS 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1917 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 592 IPR027417 -
Acco06g1917 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 354 590 IPR003439 GO:0005524
Acco06g1917 1258 Gene3D ABC transporter type 1, transmembrane domain 663 1003 IPR036640 GO:0005524|GO:0016020
Acco06g1917 1258 Pfam ABC transporter transmembrane region 694 966 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1917 1258 Pfam ABC transporter transmembrane region 31 303 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1917 1258 Gene3D ABC transporter type 1, transmembrane domain 5 333 IPR036640 GO:0005524|GO:0016020
Acco06g1917 1258 Pfam ABC transporter 375 521 IPR003439 GO:0005524
Acco06g1917 1258 FunFam ABC transporter B family member 1 673 981 - -
Acco06g1917 1258 FunFam ABC transporter B family member 1 1005 1255 - -
Acco06g1917 1258 FunFam ABC transporter B family member 9 982 1004 - -
Acco06g1917 1258 PANTHER ABC TRANSPORTER B FAMILY 8 593 IPR039421 -
Acco06g1917 1258 FunFam ABC transporter B family member 9 18 350 - -
Acco06g1917 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 31 327 - -
Acco06g1917 1258 SUPERFAMILY ABC transporter transmembrane region 17 338 IPR036640 GO:0005524|GO:0016020
Acco06g1917 1258 Pfam ABC transporter 1034 1183 IPR003439 GO:0005524
Acco06g1917 1258 MobiDBLite consensus disorder prediction 610 652 - -
Acco06g1917 1258 FunFam ABC transporter B family member 1 344 593 - -
Acco06g1917 1258 MobiDBLite consensus disorder prediction 592 663 - -
Acco06g1917 1258 CDD ABC_MTABC3_MDL1_MDL2 354 592 - -
Acco06g1917 1258 ProSitePatterns ABC transporters family signature. 1155 1169 IPR017871 GO:0005524|GO:0016887
Acco06g1917 1258 Gene3D - 345 613 IPR027417 -
Acco06g1917 1258 SMART AAA_5 381 567 IPR003593 GO:0016887
Acco06g1917 1258 SMART AAA_5 1042 1235 IPR003593 GO:0016887
Acco06g1917 1258 Gene3D - 1005 1257 IPR027417 -
Acco06g1917 1258 CDD ABC_MTABC3_MDL1_MDL2 1015 1251 - -
Acco06g1917 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 694 980 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1917 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 32 319 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1917 1258 ProSitePatterns ABC transporters family signature. 493 507 IPR017871 GO:0005524|GO:0016887
Acco06g1917 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 685 998 - -
Acco06g1917 1258 SUPERFAMILY ABC transporter transmembrane region 681 999 IPR036640 GO:0005524|GO:0016020
Acco06g1917 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1015 1252 IPR003439 GO:0005524
Acco06g1917 1258 MobiDBLite consensus disorder prediction 593 609 - -
Acco06g1917 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1004 1253 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1917 Acco-ChrAcco06 14151813 14157703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1917 14 1254 Calmodulin-binding Proteins AT2G36910 45.244 0.0 1056