Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1890 ATGTCTGATGAACCAAGTAAGGAACTTTATAACCAGGATCTTTACTTAAGCCACAGTAATCAGCAGTCCACAGGTGGATCTGCCATGTTCTGTGAGAAAAGTTTCTCTCCCTTTAATATTCCTGGCCCTTCACCATCATCATCAGGCTTTGATGATCCTCCATACATGAGTTTCACTGAATGCCTGCAAGGAGGCCTCGACTACAATTCTCTTGCTACTTCCTTTGGCCTATCTCCTTCCTCTTCGGAGGTTTTTTCTTCTGTTGAAGGCAACAATAGTAATTATCAGAAGCCTTCATCAGAAGGTCAGGGAGATGTAGGTGGTGGTGGGAGTGAAACGCCGGTGACCCAAAATTCGTCGATCTCTAATTCATCTTCTTCTGAAGCCGGAGCTGAAGAAGAAGAAGACTCAGGGAAGAGCAAGAAAGATAGTGATGAGGTCAAAGCTTCAGCAGAAGGATCTAACAATAAGAAAGGGAACAAGGGCAGGAAGAAAGGAAAGAAGCAGCAGAAGGAGGCTAGATTTGCTTTCATGACCAAGAGCGAGGTTGACCACCTAGAAGATGGTTATAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAATAGCCCTTACCCGAGAAGCTACTACAGGTGCACGACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATATCAGGACCCAACCACTGTGATAACAACCTATGAGGGTCAGCACAACCATCCTGTCCCCACTTCGCTTAGAGGGAATGCGGCCGCTATGTTCACACCTTCTTCTCTCTTAACACCACAACACACTCTTCCCTCCGCCGCCGCCGCCTCCCACCACCACGATTTCTTCCTTCACATGCCTCACCACTTCAACGCCGCCGCCGCCTCTTATAACAATCTCATTAACACTAGTACCAACAATGCTTCTAATTCTCTTCTTCATCATCAGCTTCAGCAGCAGTATCATAATAACCCTCATGATTACGGCCTCCTCCAGGACATTCTCCCTTCCATGTTCCTCAAACAAGATCATCCCTAG 1035 0.4686 MSDEPSKELYNQDLYLSHSNQQSTGGSAMFCEKSFSPFNIPGPSPSSSGFDDPPYMSFTECLQGGLDYNSLATSFGLSPSSSEVFSSVEGNNSNYQKPSSEGQGDVGGGGSETPVTQNSSISNSSSSEAGAEEEEDSGKSKKDSDEVKASAEGSNNKKGNKGRKKGKKQQKEARFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSSLLTPQHTLPSAAAASHHHDFFLHMPHHFNAAAASYNNLINTSTNNASNSLLHHQLQQQYHNNPHDYGLLQDILPSMFLKQDHP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1890 344 Gene3D WRKY domain 170 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1890 344 MobiDBLite consensus disorder prediction 132 152 - -
Acco06g1890 344 FunFam WRKY transcription factor 57 172 246 - -
Acco06g1890 344 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 96 303 IPR044810 GO:0003700
Acco06g1890 344 MobiDBLite consensus disorder prediction 12 30 - -
Acco06g1890 344 SMART WRKY_cls 186 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1890 344 Pfam WRKY DNA -binding domain 187 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1890 344 MobiDBLite consensus disorder prediction 110 128 - -
Acco06g1890 344 MobiDBLite consensus disorder prediction 39 53 - -
Acco06g1890 344 ProSiteProfiles WRKY domain profile. 181 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1890 344 MobiDBLite consensus disorder prediction 77 176 - -
Acco06g1890 344 SUPERFAMILY WRKY DNA-binding domain 178 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1890 344 MobiDBLite consensus disorder prediction 77 101 - -
Acco06g1890 344 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1890 Acco-ChrAcco06 13833694 13835173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1890 42 342 WRKY Transcription Factor Family AT4G18170 51.148 3.43e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g1890 WRKY 2.7e-25 CL0274