Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1880 ATGAGGGCAGTGATGTTGTGGAGAAATCTGGAGCAAATTGGAGTCACCGCCAAAGAATTACGGGATATGGCATTCTCACTAGTTAAATTCTCTTGCTGTCTTCATGTTACTGCCACCTATCTCGTGGACCCTTCCGTTTGCCGTGGTTCTAGCATGATTCCAACAATAGGTCCGATGAATTCCTTTTTATTGACCGAAAGGATCTCCCCCCGTTTTGGTAAAGTTGAGCGCGGCGATCTTGTCATTGTGCAGTCACCTGAAAACCCTAGAAAGTTCTCGTGCAAGCGCTTGCTTGGATTGGAGGGTGATAGTGTCACATTTCTCGTTGATCCTAAGAACAGTGATAAATGCGAGACTGTAGTGGTTCCCAAGGGACATGTTTGGGTACAGGGAGATAACATATATAATTCTAGGGATTCAAGGCAATTTGGTCCTGTTCCTTATGGTCTGCTTCATGCCAAGGTCTTCTGGAGGTTATGGCCACCTGGAGGTTTTGGACCCCTGGGCAAAATCTGA 516 0.4632 MRAVMLWRNLEQIGVTAKELRDMAFSLVKFSCCLHVTATYLVDPSVCRGSSMIPTIGPMNSFLLTERISPRFGKVERGDLVIVQSPENPRKFSCKRLLGLEGDSVTFLVDPKNSDKCETVVVPKGHVWVQGDNIYNSRDSRQFGPVPYGLLHAKVFWRLWPPGGFGPLGKI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1880 171 FunFam Inner membrane protease subunit 1 38 167 - -
Acco06g1880 171 SUPERFAMILY LexA/Signal peptidase 39 168 IPR036286 -
Acco06g1880 171 PRINTS Bacterial leader peptidase 1 (S26A) family signature 93 105 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco06g1880 171 PRINTS Bacterial leader peptidase 1 (S26A) family signature 40 56 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco06g1880 171 PRINTS Bacterial leader peptidase 1 (S26A) family signature 122 141 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco06g1880 171 Gene3D Umud Fragment, subunit A 37 165 - -
Acco06g1880 171 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 15 169 - -
Acco06g1880 171 CDD S26_SPase_I 44 155 IPR019533 GO:0004252|GO:0006465
Acco06g1880 171 Pfam Signal peptidase, peptidase S26 116 160 IPR019533 GO:0004252|GO:0006465
Acco06g1880 171 Pfam Signal peptidase, peptidase S26 23 107 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1880 Acco-ChrAcco06 13756560 13757367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1880 52 169 MADS-box Gene Family AT1G29960 56.780 2.90e-48 151