LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g1876	ATGTTTTTGCGGAGTACTCCCGCTGCGTGTTATAATTACACTGTGAAAAACCCTAATCAAGTCTGGAAAACCGGTGACATCTATGGATCCGAACTTCCTATTCTGGCCTTTCAACTGTGTTGGACCATATTCGCCACTCGCATTTTCATCCTCATTGCTAGACCCCTGCACATCCCTCGTATTATTGCCGAGGTTTTTGCTGGTTTCGTGCTCAGTGCAGATGTATTGGGGGACATATCGATATTGTTTGAGCTTCTTTTTCCTCTACGGGGCCTCATGAATATTGAAATCTTGAGCAGTATGGGTATAATCTTCTACTCCTTCTTAACTGGCTTGCAGATGAATTTAGACAACGTCCTTCGAGCACCAAAGAAGGCCCTTAGCATTGCGCTGACTGGTGCTGTCATTCCAATGGCAATGGCAACGATCATATATGCTCTGCATCGAAGAACTTACGACATTCAGACTAATGAAATCATTGAAGACAATGCAGTTAAAGCTGGCTTGTTATGGTCTTTATGTCTTTCAGTCACGGGTTTTCCAGTACTCGCTGAAATCCTCGCCAGCCTCAAGCTCCTTTATACCGAGCTAGGAAGATCAGCCTTAGATGCGGCCATAGTTAGTGACTCTTTTTCTTGGCTTCTGTATATGTCATTGATGCCATTTGCCCTTAACGATGGAGTTGGATCAATCTACACAGCGATGAGTACCATAGCATTCATCACTTTCTGCATTTTTGTGGTTCGTCCTATCATTACCCCGATTATTGATGCAATGTCCGACCGAGAAGAATGGAATGATCATCGGCTACTGTTTGTGCTGATGGGAACTATACTCTGTGCGTATATTACAGACATCCTTGGCTCTGGCATTGTTGGGGCTTTTGTGTTTGGATTGATTCTGCCTCATGGGAGATTCACCAATGTGATGATGTCTGCAGCAGATGATTTTGCTTCTGGTATTCTAGCACCAGTGGTTTTTGCAGGCTCAGGCATGAAAATGGACTTGAAGAAGGCTCTATCTCACAGAAATTTGGCATTTTCAGTGATTATTATTCTCTTGTTGTGCATCCCAAAGATTCTCAGCACTTTGGTCGCTACTTTCGCTTATGGGATCCCTATTCGAGATGGTTTGGGGCTTGGAGTGCTTATGAATACCAAAGGCGTCGTGGCTCTGATCATGCTCAACATTGCTTGGGACAGACAGATTTTGACTGCCTCATCCTACTCAATTCTAGTCTCTGCTCTTGTGATAATGACTGTAGCAGCTTCAGTTATCACCAACATTGTTTACAAACCAAGAAAGCGATTTAGGATGAACAAGATGAAGACTATACAGAACTCGAGACTTGATACCGAACTCAGGATTTTGGCTTGTGTACACAACAACCGCCATGCCAGTAGCCTGGTGAAGATCCTTGAATGCTTCCATGCCTCCAGAGTTTCCCCTCTCTATGTTGGTGCACTTTACCTTGTTGAACTAACAAGTCGTGGTGCTTTCGTGCTCCTTGACCACATGAGCCAGCATGTTTCCCAGCCAGGAACACAGAACCATAGTCAGTCACAAACTGAGATAGAAGGCATTACCAACACCTTCCAAGAATTGGCCGATTCAAATGATGCCGTTCGTGTGGAAACATTCAATGTTCTGTCAAGCTATAGTACCATTCATGAAGATATATTCAACGCAGCAAATGAAAAACACGCAAGCCTCATACTCCTCCCTTTTCACAAGCAGGTCAACACAGAAGGCTGTCTAGAAATGCTCAACAGTGCATACAAAGACGTAAACTGTAATGTCTTGCAAGAACCACCTTGTTCTGTGGGGATCTTCATCGACCGGGGCGCGTTCTCACTATCCAAAACCAATTGTCGTATTCTCATGATCTTCGTCAGCGGACCTGATGATCGTGAAGCCCTGGCTGTTGCCTGGAGAATGGCATCTCGTCCCGGAGTGCAACTCTCATTAGTGAGGATGATTCTGATTGATGAAGCTGCATATCAAGTGAATGAAGCAGTTGATCAGTTGGAAGCCAAAGGGATGTTATCCACAGTTCTGGATAGTTCCAAGCAAAAAGAGCTGGATGATGAGTATGTCAACTTATTTAGGCTCAAGGCAATGCACGATGAAGACTCCATAACTTATACAGAGAGGAAGATTCATGGGGGTGAGGATATTCCTGCTTTACTAAATGAGTTAGACCAGGGTGATTATCAGCTGTATATAGTGGGACAAGGAAGAGGCAGGAACTCTGTGATATTCTCAGATTTCATGGACTGGTGTGATTGCCTTGAGCTTGGAGCTATAGGGGACATATTGGCTGCCAACAGTTTTGGGTCTAAATCTTCTGTGCTTGTTGTGCAGCAATATGGATATGATGGAACTGTGCCAGAAAATGCCGGTCACAGACATCCAAATGATTTTGAAACAAATGAAGATGGCGATGATACGCTTGTTAATCGTGTCTGA	2469	0.4415	MFLRSTPAACYNYTVKNPNQVWKTGDIYGSELPILAFQLCWTIFATRIFILIARPLHIPRIIAEVFAGFVLSADVLGDISILFELLFPLRGLMNIEILSSMGIIFYSFLTGLQMNLDNVLRAPKKALSIALTGAVIPMAMATIIYALHRRTYDIQTNEIIEDNAVKAGLLWSLCLSVTGFPVLAEILASLKLLYTELGRSALDAAIVSDSFSWLLYMSLMPFALNDGVGSIYTAMSTIAFITFCIFVVRPIITPIIDAMSDREEWNDHRLLFVLMGTILCAYITDILGSGIVGAFVFGLILPHGRFTNVMMSAADDFASGILAPVVFAGSGMKMDLKKALSHRNLAFSVIIILLLCIPKILSTLVATFAYGIPIRDGLGLGVLMNTKGVVALIMLNIAWDRQILTASSYSILVSALVIMTVAASVITNIVYKPRKRFRMNKMKTIQNSRLDTELRILACVHNNRHASSLVKILECFHASRVSPLYVGALYLVELTSRGAFVLLDHMSQHVSQPGTQNHSQSQTEIEGITNTFQELADSNDAVRVETFNVLSSYSTIHEDIFNAANEKHASLILLPFHKQVNTEGCLEMLNSAYKDVNCNVLQEPPCSVGIFIDRGAFSLSKTNCRILMIFVSGPDDREALAVAWRMASRPGVQLSLVRMILIDEAAYQVNEAVDQLEAKGMLSTVLDSSKQKELDDEYVNLFRLKAMHDEDSITYTERKIHGGEDIPALLNELDQGDYQLYIVGQGRGRNSVIFSDFMDWCDCLELGAIGDILAANSFGSKSSVLVVQQYGYDGTVPENAGHRHPNDFETNEDGDDTLVNRV	822

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g1876	822	MobiDBLite	consensus disorder prediction	796	822	-	-
	Acco06g1876	822	Gene3D	-	34	441	IPR038770	-
	Acco06g1876	822	PANTHER	CATION/H + ANTIPORTER	27	790	-	-
	Acco06g1876	822	MobiDBLite	consensus disorder prediction	800	822	-	-
	Acco06g1876	822	Pfam	Sodium/hydrogen exchanger family	44	429	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g1876	Acco-ChrAcco06	13729679	13732423	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g1876	10	804	Antiporter Super Family	AT2G13620	36.621	1.95e-176	527