Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1868 ATGGTGACTTTTAGGTTCCATCAGTATCAGGTCGTTGGGAGGGCTCTCCCTACGGAGTCAGATGATCACCCGAAAATTTTTCGCATGAAGTTATGGGCCACTAACGAGGTGCGCGCCAAGTCGAAGTTCTGGTATTTTCTGAGGAAACTGAAAAAGGTCAAAAAGAGCAATGGTCAAGTGCTTGCGATCAATGAGATCTTTGAGAAGAACCCAACAAAGATAAATAACTATGGCATTTGGCTGCGGTATCAGAGCAGGACTGGCTACCACAACATGTACAAGGAATACCGTGATACCACTCTAAATGGTGCAGTCGAGCAGATGTACAATGAGATGGCTTCCCGCCACAGGGTTCGGTTCCCCTGCATTCAAATCATCAAGACTGCCACGATCCCTGCAAAGCTTTGCAAAAGGGAGAGCAGCAAACAGTTCCACAACTCCAAAATCAAGTTCCCATTGGTTTTCAAGAAGATCAGGCCACCCACAAGAAAGCTGAAGACCACGTTCAAGGCATCAAGGCCCAATTTGTTTATGTAA 537 0.4618 MVTFRFHQYQVVGRALPTESDDHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVFKKIRPPTRKLKTTFKASRPNLFM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1868 178 SUPERFAMILY RplX-like 71 146 - -
Acco06g1868 178 Gene3D - 1 70 - -
Acco06g1868 178 Gene3D - 71 143 - -
Acco06g1868 178 Hamap 50S ribosomal protein L18Ae [rpl18a]. 6 69 IPR028877 -
Acco06g1868 178 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 7 128 IPR023573 GO:0003735|GO:0005840|GO:0006412
Acco06g1868 178 PIRSF Ribosomal_L18a 1 178 IPR021138 GO:0003735|GO:0005840|GO:0006412
Acco06g1868 178 FunFam 60S ribosomal protein L18a 1 71 - -
Acco06g1868 178 PANTHER 60S RIBOSOMAL PROTEIN L18A 3 177 IPR028877 -
Acco06g1868 178 FunFam 60S ribosomal protein L18a 72 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1868 Acco-ChrAcco06 13684062 13686106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1868 1 178 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 88.764 1.60e-121 340
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g1868 06 13684062 13686106 Acco06g1868 06 13684062 13686106 ECH