Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1862 ATGTCACTTTCCTGTGCAAAAAAATTCTTCCAGAGGTTCTGGGTGGATGAATTCCAAATGGGAAGTTTTGCACATAGCAGCTTTCTGTCTAGTGATCTTCTGCCATCCCTTGGAGCCCGAATCAACGAAGAAACTAGACTTCGAAGATACATAATCTCCCCCTTCAACTCCTGGTATAGGGCTTGGGAGATGTTACTGATTGTCCTGGTCATCTACTCAGCCTGGATTAGTCCCTTTGAGTTTGCATTTCTTTCTTACAAGCAAGATGCACTATTTATCATCGACAACACTGTCAATGGCTTCTTTGCCATTGACATAGTCCTGACATTCTTTGTTGCATATCTAGATAGTCACTCTTACCTTCTTGTTGACGATCACAAGAAAATTGCAACAAGGTACCTTTCCTCCTGGTTCATTTTCGATGTCTGCTCAACGGCACCATTTCAGTCCATCAGTCTACTCTTTACTAAACACAGTAATCTTGGCTTTAAACTGCTTAACATGCTTCGGTTATGGCGTCTGAGACGTGTCAGCTTTCTGTTTGCAAGCTCCCTTGCTTCCTCCTCAGGCTTGAGAAAGACATCCGCTTCAACTATTTCTGGACTAGGTGCACTAAGCTCATTTCTAGGATTAAACCTTAATGTGATTGCCCCTCGCATCAAATCTCAGGTAACCTTGTTTGCAGTGCACTGTGCCGGATGCTTTAATTATCTGCTTGCAGATAGATATCCTGATTCTAAAAGGACCTGGATTGGTGCTGTGTACCCAAATTATAAAGAACTGAGTCTCTGGGAGAGATATGTGACTTCAATATATTGGTCCATTGTCACACTTACAACTACAGGCTACGGGGACTTGCATGCTGAAAACACAGGAGAGATGCTGTTCGATATCTTTTACATGTTGTTCAACTTGGGATTAACGTCATATATCATTGGGAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTTAGAGACTCAGTAAGAGCAGCTACAGAATTTGCTTTAAGAAACCATTTGCCCCATCATATACAAGATCAAATGTTGTCGCACATGTGTTTGAGATTTAAGACGGAAGGATTGAAGCAACAAGAAGCACTAAATGGTCTGCCCAAGGCGATTCGTTCAAGCATTTCACACCATCTATTTTCCCCTATACTGCAGAAAGTCTATCTCTTCCAAGGAGTCTCTCATGACCTTCTTTTCCAACTGGTTTCAGAAATAGAAGCAGAATATTTCCCGCCCAAGGAAGAAGTGATCCTGCAAAACGAGTCTCCAACTGACCTTTATGTACTGGTTTCAGGGGCAGCGGATATCATTCGCTACATTGATGGACGAGATCAAGTTATCGGTAAGGCAACTGGAGGGGATACAGTTGGTGAGATTGGGGTTTTATACTACAGACCACAGCCCTTCACAGTTAGGACCGTGGAGCTATCTCAAATATTAAGACTTAGCAGAACTTCCTTAATGAATGCCATACAAGCAACTCCAGAAGATACACAAATTATAATGAACAATCTTTTCATGAAACTTAGGGGACAAGGCCTGGGCTCTGAATATGTCCATGAAATGCTTGGTGGAACAAGAATAGAAGGCTGTACGAAAAATTCAAATGGAAGTTCCAGAATGAAAGAAGGAGAATTCAAAGATTTTACAGACTTGGAAGACCCTACTCGTGATGCTGCAAAGGACAGTCAACAAGATATGATTGAAATTTTGCTCCAAAGGGACACAAATGCAAAGAGTCTAAATTCCCAACCACGGACTCCAAAAGTTCCAGTAGAACAGCAAGAAAACAAGAGCATTCCTGACCTCCTAGTGAGTAGTGAAAATAGGAGAAGATCAGATGAATATAGAATAGATTTGGTGGCTAGGAATGATCTAACCAGAAGCAGAAAACACGATGGTCCCAGGCCCATCAATTTCCCGATGGAAATGGTCTGCCCAAATTCGGGAAATCCCAATGTCCCAGGTAATAGAGAAATGGCAAAACGCATAAAAAAAAGAGTTACCATCCATTTGATCTGTGAATACTGTAGTGCTTCAAAGGGGCATGGAAAATTGATACTTTTACCTGATTCATTAGAAGAGCTGCTCAAGGTTGCTGGTCACAAATTTGAAGGCTCCAAACCTACAAACGTTGTTACTGCAGAAAATGCAGAGATAGATGACATAAGCATCATTCAAGACGGTGATCATCTCTTCCTTCTTTGCAGTGTTAGAGAACATTTGAATTCATGA 2259 0.417 MSLSCAKKFFQRFWVDEFQMGSFAHSSFLSSDLLPSLGARINEETRLRRYIISPFNSWYRAWEMLLIVLVIYSAWISPFEFAFLSYKQDALFIIDNTVNGFFAIDIVLTFFVAYLDSHSYLLVDDHKKIATRYLSSWFIFDVCSTAPFQSISLLFTKHSNLGFKLLNMLRLWRLRRVSFLFASSLASSSGLRKTSASTISGLGALSSFLGLNLNVIAPRIKSQVTLFAVHCAGCFNYLLADRYPDSKRTWIGAVYPNYKELSLWERYVTSIYWSIVTLTTTGYGDLHAENTGEMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDSVRAATEFALRNHLPHHIQDQMLSHMCLRFKTEGLKQQEALNGLPKAIRSSISHHLFSPILQKVYLFQGVSHDLLFQLVSEIEAEYFPPKEEVILQNESPTDLYVLVSGAADIIRYIDGRDQVIGKATGGDTVGEIGVLYYRPQPFTVRTVELSQILRLSRTSLMNAIQATPEDTQIIMNNLFMKLRGQGLGSEYVHEMLGGTRIEGCTKNSNGSSRMKEGEFKDFTDLEDPTRDAAKDSQQDMIEILLQRDTNAKSLNSQPRTPKVPVEQQENKSIPDLLVSSENRRRSDEYRIDLVARNDLTRSRKHDGPRPINFPMEMVCPNSGNPNVPGNREMAKRIKKRVTIHLICEYCSASKGHGKLILLPDSLEELLKVAGHKFEGSKPTNVVTAENAEIDDISIIQDGDHLFLLCSVREHLNS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1862 752 SUPERFAMILY Voltage-gated potassium channels 54 319 - -
Acco06g1862 752 FunFam Potassium channel KAT3 61 321 - -
Acco06g1862 752 Gene3D Jelly Rolls 365 521 IPR014710 -
Acco06g1862 752 ProSiteProfiles KHA domain profile. 675 752 IPR021789 -
Acco06g1862 752 FunFam Potassium channel KAT2 385 521 - -
Acco06g1862 752 Pfam KHA, dimerisation domain of potassium ion channel 674 742 IPR021789 -
Acco06g1862 752 Gene3D - 60 320 - -
Acco06g1862 752 PANTHER POTASSIUM CHANNEL AKT1 25 518 IPR045319 GO:0005249|GO:0006813
Acco06g1862 752 ProSiteProfiles cAMP/cGMP binding motif profile. 397 516 IPR000595 -
Acco06g1862 752 MobiDBLite consensus disorder prediction 583 612 - -
Acco06g1862 752 PRINTS EAG/ELK/ERG potassium channel family signature 311 320 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco06g1862 752 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco06g1862 752 PRINTS EAG/ELK/ERG potassium channel family signature 293 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco06g1862 752 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco06g1862 752 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco06g1862 752 PRINTS EAG/ELK/ERG potassium channel family signature 267 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco06g1862 752 SUPERFAMILY cAMP-binding domain-like 324 517 IPR018490 -
Acco06g1862 752 CDD CAP_ED 397 510 IPR000595 -
Acco06g1862 752 SMART cnmp_10 397 514 IPR000595 -
Acco06g1862 752 MobiDBLite consensus disorder prediction 583 615 - -
Acco06g1862 752 Pfam Ion transport protein 60 326 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco06g1862 752 MobiDBLite consensus disorder prediction 636 664 - -
Acco06g1862 752 Pfam Cyclic nucleotide-binding domain 417 500 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1862 Acco-ChrAcco06 13628091 13631903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1862 1 742 Ion Channels AT5G46240 56.528 0.0 817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g1862 06 13628091 13631903 Acco06g1862 06 13628091 13631903 ECH