Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1827 ATGAGGCGGAATTGCAACTTGGAGCTTCGTCTTTTTCCTTCCTTTGAAACCGGGTCGACGGAACAAGATGGTGAGAGCCCACAGCAAAATCTGCAGAAGCTCACTATTTTCTATGACGGCAAGATGTGTGTTTTCGATGTCACCGAGGTTCAGGCTAGATGGATCTTGATGCTTGCAAATAGAGAAATGAAGGAAAGAGCAAGGACACCAAACGGGTCCGGGTCGGAGCCATCTTCACCAAATACTACAGTGCCATTGTATAGCCCAAATAGTGGTCTTTCTATGAAAAGATCGCTCCAAAGTTTCCTTCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCCCCCTACCATCACTAA 357 0.4566 MRRNCNLELRLFPSFETGSTEQDGESPQQNLQKLTIFYDGKMCVFDVTEVQARWILMLANREMKERARTPNGSGSEPSSPNTTVPLYSPNSGLSMKRSLQSFLQKRKNRILEASPYHH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1827 118 MobiDBLite consensus disorder prediction 71 92 - -
Acco06g1827 118 Pfam Jas motif 96 116 IPR018467 -
Acco06g1827 118 SMART tify_2 27 61 IPR010399 -
Acco06g1827 118 Pfam tify domain 29 60 IPR010399 -
Acco06g1827 118 ProSiteProfiles Tify domain profile. 27 61 IPR010399 -
Acco06g1827 118 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 23 116 IPR040390 -
Acco06g1827 118 MobiDBLite consensus disorder prediction 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1827 Acco-ChrAcco06 13256882 13258184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1827 1 117 Tify Gene Family AT1G30135 45.802 1.16e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco06g1827 tify 4.2e-12 No_clan