Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1820 ATGGAGGAAGATGCGATTCCAGCGCAAGCGTGTAAATTCACCAGAGTCGGAAATGGCAGAAACGACTCCAACAAGATAGGTTCTAGAGGGAGCGGCGGCGGCGCTGGAGCTTGCGGCGACGTCAGCTCGAATCGGTTCCAGAGCTGGCATCACCATTCTTCGAGAATCATTAGGGTTTCTCGAGCATCTGCAGGGAAAGACCGGCACAGCAAGGTGATGACTTCCAAGGGTTTAAGAGACCGAAGGGTTAGGCTGTCGGTAACCACAGCAATCCAGTTCTATGATCTTCAAGATCGGCTTGGCTATGACCAGCCCAGCAAAGCTGTGGAGTGGCTAATCAAAGCAGCTTCTGACGCCATTTCTGAGCTTCCTTCTCTCAACAACACATTCCCTGATAAGCAGCCCAGCGATGAGAAAAGAGGAACCGAACAAGGGTTTGATGATACAGCTGATCATGCTGAGGTAAATGCCGATGAGGGTGATTATCACCAGACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCTTGCAGCAGCACTTCTGAAACAAGCAAAGGCTCTGGTTTGTCCCTCTCAAGGTCTGAGATTCGAGTGAACCGTGTGAAGGCCAGAGAGAGGGCAAGAGAGAGAGCAGCAAAAGAGAAGGAAAAAGAAAACACTGACCATCCCCACAATAATGTGAATAACCCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTCACCGGCGGGGTTAATACTACTGTTAATCCTTCCACCACCACGAGTCCGACCGGCGATGATCATGAGCCTGATTTGTTCAACAAGGCAGCGAGACAGCAATGGTGTACAACGACACCCATGGACTACTTTAATTCAGGCCTCGTGGAGAATCATCACTCTATTAGAACTCATAATAATAACAATCAATCTTCAGGGTTATTCTCAGGACAAATCCAACTGGGAAACTCTAATTCCCTTCCTCTTCAGGCACTGTCTGTTTCCCCATTCAATGTGGGGAGCGAAAATCACACAGATCAGCTCCAGCATTTCTCATTATCCACCATGCCTGACCATCATCTCATACCCAGCGGAAGCTGCAGCGACTACAACCTCAACTTCACCATCTCTTCTTCTTCTTCTTCAGGCTTTGCTGGTTTCAACAGGGGGACCCTTCAGTCCAATTCACCGTCTATTTTGCCTCACCCTCTTCAGAGAATCACCACCACCACCACCAGTTCTCATCATCACCTGGATTTGATGGCCGTTTGCAACTATGTTATGGAGACTTAA 1272 0.4827 MEEDAIPAQACKFTRVGNGRNDSNKIGSRGSGGGAGACGDVSSNRFQSWHHHSSRIIRVSRASAGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPDKQPSDEKRGTEQGFDDTADHAEVNADEGDYHQTQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKENTDHPHNNVNNPISQTASFTELLTGGVNTTVNPSTTTSPTGDDHEPDLFNKAARQQWCTTTPMDYFNSGLVENHHSIRTHNNNNQSSGLFSGQIQLGNSNSLPLQALSVSPFNVGSENHTDQLQHFSLSTMPDHHLIPSGSCSDYNLNFTISSSSSSGFAGFNRGTLQSNSPSILPHPLQRITTTTTSSHHHLDLMAVCNYVMET 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1820 423 ProSiteProfiles R domain profile. 197 215 IPR017888 -
Acco06g1820 423 MobiDBLite consensus disorder prediction 161 194 - -
Acco06g1820 423 Pfam TCP family transcription factor 64 217 IPR017887 -
Acco06g1820 423 MobiDBLite consensus disorder prediction 161 231 - -
Acco06g1820 423 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 35 386 IPR005333 GO:0003700
Acco06g1820 423 MobiDBLite consensus disorder prediction 244 263 - -
Acco06g1820 423 MobiDBLite consensus disorder prediction 16 39 - -
Acco06g1820 423 MobiDBLite consensus disorder prediction 124 146 - -
Acco06g1820 423 MobiDBLite consensus disorder prediction 197 223 - -
Acco06g1820 423 ProSiteProfiles TCP domain profile. 65 123 IPR017887 -
Acco06g1820 423 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1820 Acco-ChrAcco06 13191695 13193036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1820 44 403 TCP Transcription Factor Family AT4G18390 45.195 8.80e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco06g1820 TCP 8.7e-41 No_clan