Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1782 ATGGTAGCTACCGTGATGATGGGTTCAGAGGAAGCCTGGAAGAAAGGGCCTTGGACTCTTGAAGAGGATAAGCTGCTCAGTGAATATGTGAGCTTGCATGGTGAAGGAAGATGGAGTTCAGTGTCCAAGTTTACAGGGTTAAATAGGAGTGGGAAAAGTTGCCGGTTGAGGTGGGTGAATTATTTAAAGCCAGGCCTGAAGAAAGGTCACTTAACACCTCAAGAAGAAGCCATCATATTTGAAATCCATGCTATGCTCGGTAACAAGTGGTCTACAATAGCAAAATATTTGCCAGGGAGAACAGACAACGAGATTAAGAACTACTGGAGGACCCACTTCAATAAGAAAGACAAATCCTCTCGTATTAGTAAGAGGCAAGAAAAGAGAAGATCAAGAATTCTAAAACAGATGAAACAACAAGAGCAGCAGCAGCAACCTCAACAGTACTATGACGTGCAAAGCAGCATCTTGTCGGCTCATTCAGAGTCAAACAATCAAATTACAAGCAACGTCTCTGTTGGGACTAATGTTCTAGAAGACAGCTTCCATCCATTAGTTGCCACCATGGAAGACCAATATAATTACTTGCCTTTCATGTACCAAGATTATTTTCCGTCACCGTGGCCTGAAACTCCTGTAGAACAAGATGAAGGCTTGTTGATTACGTTATGGAACCTCGACGAAGAAACAGTACAAGGTCATGGCGGAGACAATAAGTTCAACGAAAATAATGCCAATAACCAGATTACAACTTCTTGTTTCGATGATATTTCCAACAACCTCTGCCTTGCAAAATACATGTCCGGCTGA 810 0.4222 MVATVMMGSEEAWKKGPWTLEEDKLLSEYVSLHGEGRWSSVSKFTGLNRSGKSCRLRWVNYLKPGLKKGHLTPQEEAIIFEIHAMLGNKWSTIAKYLPGRTDNEIKNYWRTHFNKKDKSSRISKRQEKRRSRILKQMKQQEQQQQPQQYYDVQSSILSAHSESNNQITSNVSVGTNVLEDSFHPLVATMEDQYNYLPFMYQDYFPSPWPETPVEQDEGLLITLWNLDEETVQGHGGDNKFNENNANNQITTSCFDDISNNLCLAKYMSG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1782 269 Coils Coil 123 144 - -
Acco06g1782 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Acco06g1782 269 MobiDBLite consensus disorder prediction 115 149 - -
Acco06g1782 269 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Acco06g1782 269 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Acco06g1782 269 CDD SANT 72 113 IPR001005 -
Acco06g1782 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Acco06g1782 269 FunFam Myb transcription factor 15 67 - -
Acco06g1782 269 Gene3D - 71 150 - -
Acco06g1782 269 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 10 218 - -
Acco06g1782 269 Gene3D - 14 67 - -
Acco06g1782 269 SMART sant 67 115 IPR001005 -
Acco06g1782 269 SMART sant 14 64 IPR001005 -
Acco06g1782 269 MobiDBLite consensus disorder prediction 117 132 - -
Acco06g1782 269 CDD SANT 17 62 IPR001005 -
Acco06g1782 269 Pfam Myb-like DNA-binding domain 71 112 IPR001005 -
Acco06g1782 269 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Acco06g1782 269 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1782 Acco-ChrAcco06 12845787 12846803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1782 14 236 MYB Transcription Factor Family AT3G30210 49.565 1.73e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g1782 Myb_DNA-binding 5.5e-17 CL0123