Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1780 ATGGCTGTCTTCTTGGTCGCAATTATCTGTGTGTTCTTGGTGCTCTGTTTTTGCTCTGCTCTGTTGAGGTTGAATGAAGTTCGTTTCAGCAAGAAGGGTTTGCCTCCTGGCACCATGGGTTGGCCTGTCTTTGGAGAAACCACTGAGTTTCTCAAGCAAGGTCCAAGCTTCATGAAAGACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGGTGTCCTACCATAGTGTCCATGGATGCAGAACTGAACAGATACATCTTAATGAATGAATCAAAAGGGCTTGTTCCAGGATACCCACAATCCATGTTAGATATCTTAGGCAAATGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGTGCTCTCTTATCCATCATCAGCCCCACCATGATCAGAGATCAGCTTTTGCCTAAAATCGACCACTTCATGAGAACCCACTTGACCAATTGGGATAACAAGCTCATTAACATCCAAGACAAAACCAAAGAGATGGCGTTTCTGTCATCTCTGAAGCAAATTGCTGGCATCGAATCCAGCTCAATCTCTGGTCAATTCATGTCAGAGTTCTTCAAGCTTGTTTTAGGAACACTCTCTCTTCCTATCGACCTTCCTGGCTCCAATTATCGCCGTGGAATTCAGGCAAGGAAGAACATTCTGAGCATTCTGAATCAGCTGCTAGAGGAAAGAAGAGCTGCTTCCCCAGAAACTCACCAAGACATGCTTGGATGCTTGATGAGAAAAGATGATTGTAGATACAAATTAACTGATGAAGAAATCATTGATCTGATCATTACCATTATATATTCTGGGTATGAGACTGTTTCAACCACTTCAATGATGGCCGTGAAGTACCTCCATGATCACCCAAAAGTTCTCGAAGAACTCAGAAAAGAGCATTTCGCCATAAGAGAGAAGAAAAAGCCAGATGATCCAATCGACTGGGACGATCTCAAATCAATGAAGTTTACCCGAGCTGTGATATTTGAGACCTCGAGATTGGCCACAATAGTGAATGGAGTGTTAAGGAAAACGACCAAGGAAATGGAACTAAACGGATATTTGATTCCCAAAGATTGGAGGATTTATGTTTATACCAGAGAGATCAATTACGATCCCTTTCTGTATCCTGACCCACCTGCTTTCAACCCATGGAGATGGCTGGAGAAGAGCATAGAATCACAGAACTGTTTCTTCATATTTGGAGGAGGAACAAGGCAGTGTCCAGGAAAAGAGTTGGGGATAGCAGAAATCTCAACGTTCTTGCACTATTTTGTGACCAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCAAGAGTGGAAGCGCCAAATGGATTTCGCATCAGGGTCTCATCTTACTGA 1398 0.4306 MAVFLVAIICVFLVLCFCSALLRLNEVRFSKKGLPPGTMGWPVFGETTEFLKQGPSFMKDQRARYGSFFKSHILGCPTIVSMDAELNRYILMNESKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTMIRDQLLPKIDHFMRTHLTNWDNKLINIQDKTKEMAFLSSLKQIAGIESSSISGQFMSEFFKLVLGTLSLPIDLPGSNYRRGIQARKNILSILNQLLEERRAASPETHQDMLGCLMRKDDCRYKLTDEEIIDLIITIIYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHFAIREKKKPDDPIDWDDLKSMKFTRAVIFETSRLATIVNGVLRKTTKEMELNGYLIPKDWRIYVYTREINYDPFLYPDPPAFNPWRWLEKSIESQNCFFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGFRIRVSSY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1780 465 CDD CYP90-like 61 463 - -
Acco06g1780 465 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 PANTHER CYTOCHROME P450 26 31 443 - -
Acco06g1780 465 SUPERFAMILY Cytochrome P450 28 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 FunFam Cytochrome P450 85A1 25 464 - -
Acco06g1780 465 Gene3D Cytochrome P450 25 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 Pfam Cytochrome P450 35 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Acco06g1780 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1780 Acco-ChrAcco06 12805607 12808379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1780 82 465 Cytochrome P450 AT5G38970 71.169 0.0 577