LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g1773	ATGAGGAAGCAGATCACCTCTCCAACAAAGTCAAAACGTTCACCCTTGTCATATTTCTTCGGGGGGAAACGGCACGCTCACACGCAAGCCTCGTTTCCGCTCCAAGAATTCAGAAGAGTTGCTCGCCTCCTTTCGGCGTTGGATGGGTTCCTCAGTTTCCTGCGAATTTTGATATATTGGATCCTAGGGTCCAGAGATCCGATGGCAGCGTCTGATTCGCGAGCCCACTCGTTTGGCCAGACCGAGATTAACTGGGACAAGCTAGATAAAACTAAATTCTATGTTGTAGGAGCTGGGCTCTTTACAGGTGTCACATTGGCACTCTACCCAGTTTCCGTGGTGAAGACTAGACTGCAGGTTGCCACAAAGGATACTGCAGAAAGAAATGCATTTTCTGTTGTAAAGGGGTTACTCAGAACGGATGGCATTCCCGGTCTGTATAGAGGATTTGGCACTGTCATCACTGGTGCAATTCCTGCCAGAATCATATTCCTTACTACCCTAGAGACCACTAAGGTGGCCACCTTTAGGATGCTTGAACCATTCAGACTCTCTGAAACCACCCAGGCAGCCGTAGCAAATGGAGTTGCAGGCTTGACATCATCGATTTTCGCTCAAGCTGTGTTTGTTCCGATTGATGTGGTGAGCCAAAAAATGATGGTGCAAGGCTACTCAGGTCATGCTCAATATAATGGCGGTCTGGATGTTGCTCGTAAAGTGTTAAGATCAGATGGCATCAGTGGATTATATAGAGGATTTGGTCTTTCTGTTATGACTTATGCTCCTTCTAGTGCTGTATGGTGGGCATGCTACGGTTCAAGCCAACGCTTAATTTGGAGATTCTTGGAACATAGTGCAGAAAATAAGGAAGGCAAACCCAGTGTGTCGAAGATTGTGTTAGTTCAGGCTACTGGGGGAATAATTGCTGGCGCAACTGCATCCTGCATTACAACACCTTTGGATACCATTAAGACACGATTACAGGTGATGGGACATGAAAATAAAAGCTCTGTGAAACAAGTTGTGAAAGAATTGATAAACGAGGATGGTTGGAAAGGTTTATACAGAGGGTTAGGTCCAAGATTTTTCAGCATGTCGGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCTTGTGTGCAAAAGATGAATAG	1164	0.4553	MRKQITSPTKSKRSPLSYFFGGKRHAHTQASFPLQEFRRVARLLSALDGFLSFLRILIYWILGSRDPMAASDSRAHSFGQTEINWDKLDKTKFYVVGAGLFTGVTLALYPVSVVKTRLQVATKDTAERNAFSVVKGLLRTDGIPGLYRGFGTVITGAIPARIIFLTTLETTKVATFRMLEPFRLSETTQAAVANGVAGLTSSIFAQAVFVPIDVVSQKMMVQGYSGHAQYNGGLDVARKVLRSDGISGLYRGFGLSVMTYAPSSAVWWACYGSSQRLIWRFLEHSAENKEGKPSVSKIVLVQATGGIIAGATASCITTPLDTIKTRLQVMGHENKSSVKQVVKELINEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g1773	387	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	297	382	IPR018108	-
	Acco06g1773	387	FunFam	Mitochondrial substrate carrier family protein	94	386	-	-
	Acco06g1773	387	SUPERFAMILY	Mitochondrial carrier	86	379	IPR023395	-
	Acco06g1773	387	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	90	174	IPR018108	-
	Acco06g1773	387	PANTHER	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J	71	386	-	-
	Acco06g1773	387	Gene3D	Mitochondrial carrier domain	94	387	IPR023395	-
	Acco06g1773	387	Pfam	Mitochondrial carrier protein	301	386	IPR018108	-
	Acco06g1773	387	Pfam	Mitochondrial carrier protein	191	278	IPR018108	-
	Acco06g1773	387	Pfam	Mitochondrial carrier protein	98	173	IPR018108	-
	Acco06g1773	387	PRINTS	Mitochondrial carrier protein signature	250	268	IPR002067	GO:0055085
	Acco06g1773	387	PRINTS	Mitochondrial carrier protein signature	306	328	IPR002067	GO:0055085
	Acco06g1773	387	PRINTS	Mitochondrial carrier protein signature	106	120	IPR002067	GO:0055085
	Acco06g1773	387	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	189	277	IPR018108	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g1773	Acco-ChrAcco06	12766442	12771608	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g1773	83	387	Chloroplast and Mitochondria Gene Families	AT5G15640	75.244	1.02e-172	482