Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1758 ATGTTTCCTTCTTCCTGTACTTCACTGATCAAATGGCGTTTCTTTCACAAGCCCATGCCCCCCTTGCTTCTTCTGGAATTCTACTTTCTCTTATTGGTCCTCTTCCCGTCTTGTAGTGACGCCTTTCTCGCCGATTCCGACAAATCAGTGCTTCTTCATTTCAAGAGTTCGGTCTCTGATCCATCGGGGCTGCTTTCGAGCTGGAATTCGGCCGGAGATTCCAATCACTGTTCTTGGTTCGGTGTTCTCTGCGACTCGAATTCGCGGGTTCTCGCCCTCAACATTTCTGGAAATGGTGGTGGAAGTAATCGAAGCTCTTCTCCTTGTTCTGATTCTGCGAAATTTCCACTTTATGGGTTGGGAATTAGGAGGAGCTGTGACGGCAGTAGAGGAGCATTGTCTGGGAAGTTTTCGCCTCTCATCAGTAAGCTTACTGAGCTCAGGATTCTGTCACTTCCGTTTAACGGTTTTGAGGGTGAAATTCCTCCTGAAATTTGGGGTATGGGCAAGTTGGATGTTCTCGACCTAGAGGGCAACTCCATAACTGGGTCACTTCCGTCTCATTTTGATGGCTTGAGGAACTTGCGAGTTCTTAATCTCGGGTTTAATAATATTGTCGGGGAGATACCAGACTCGCTTGCACGTCTTGAAAGTTTGGAAATTTTGAATTTAGCCTCGAATGGCTTGAATGGATCTGTTCCTGGGTTCATCGGTAAGCTGAAGGGGGTGTCTCTGATGTTTAATCTGCTTAGTGGGCCTATACCACTTGAGATCGGGGATAGCTGTGGGAGGCTTGAACATCTGGATTTGTCAGGTAACTTCTTAGTTCAGCGAATTCCAAGCAGTTTGGGAAACTGTAGTCAATTACGGTCACTTTTGTTGTATTCAAATTTGTTGGAAGAGGTAATTCCTTCCGAACTCGGTCAACTTCAGCTGCTTGAAGTGTTGGATGTTTCAAGAAATGCTCTCAGTGGTCCAGTACCTCCCGAAATTGGGAATTGCTCAGAGCTGTCTGTCCTTGTGCTATCAAATCTTTTCAATCCACTTCCTGAAGTCAACAATACTGTAAGGGAATCTTCGCAATTGGTTTCTATAAATGATGAATTGAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACATCCCTCCCAAAGCTGAGAATATTATGGGCACCAAGGGCAACACTGGAAGGTCGTTTCCCAAGCAGTTGGGGTGCTTGTGATAACTTAGAGATGGTCAACTTGGCTCAGAATTATTTCAATGGGGAATTTCCTAATCAGCTTAGTGGCTGCAAAAAGCTGCATTTTCTTGATTTGAGCTCAAACAACCTTACTGGAGAGCTTGCTGAAGAACTTCATGTTCCTTGTATGACTGTGTTTGATGTCAGTGGGAATATCTTGTCTGGTTCAATTCCTGAATTTTTTAATGGTACTTGTCCTTCAGTTCCTTCCTGGAATGGCAATCTGTTTGAACTTGACAATGTCTCAATTCCATATATGTCATTTTTTTCAACAAAGGTTCATGATGGATCCCTTTTGACTTCAGCGGGAGAAGTTGGTCTGTCAGTTATTCACAATTTTGGGAACAACAATTTTACTGGCATGCAGTCATTGCCCATAGCACATGACAGATTGGCGAAGAAGATGGGTTACGTGTTTCTTGTTGGAGAAAATAAGCTTACAGGGCCGTTTCCTACCAACATATTTGATAAGTGTGATGGATTAGATGCACTGCTCTTAAATGTCAGTTATAATAGGTTTTCTGGTCAGATTCCTGCTAAGTTTGGTGGAATGTGCGGGTCATTAAAATTTTTGGATGCATCAGGGAATCGGATAGCTGGACCAGTTCCTGTTGGTTTGGGGGAATTGGTATCTCTTGTTTCTCTGAACCTTGGTCGGAATCAGTTACAAGGTTTGATTCCCGCCAGCCTTGGCCAGATGAAAAATTTGGTGTTTCTTTCCATGGCCTCTAATAACTTAACTGGCTCTATTCCTACCAGCCTGGGGCAGTTGTACTCTTTAGAAGTTTTGGATCTTTCATCTAATTCTCTCACGGGTGAGATTCCAAAGGGTTTTGAGAACTTGAGAAATCTGACTGGTCTTCTGCTCAACAACAACAAACTTTCTGGACATATCCCTACTGGTCTGGCAAATGTCACTACACTCTCAGCATTTAACGTGTCCTTCAATAACTTGTCTGGATCTTTGCCATCAGATAATAACTTGTTGAAATGCAGTAGTGCTGTTGGGAATCCATTTTTACGTCCTTGCCATATGCTTTCTTTGACCACACCATCAACAGATCAACAAGGGCCGGTAGCTGATTATAATTCTAATTCTGCTGCAGCACCAGAAACTGCCAGCAAAGATAGTGGGTCTGGCTTCAATTCTATTGAAATAGCATCTATAACGTCTGCATCAGCCATCGTTTCTGTTCTTATAGCCCTGATAATTCTGTTCTTTTATACCCGTAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCAACAAGAAAAGAAGTTATTGTTTTTACTGATATTGGGGTTCCATTGACTTTTGAAACTGTCGTTCGTGCCACTGGCAATTTCAATGCAAGCAATTGTATTGGAAATGGAGGATTTGGTGCAACCTATAAGGCAGAGATAGCACCAGGAAATCTAGTGGCTATAAAACGTCTGTCAGTAGGACGATTCCAAGGTGTTCAACAATTTGATGCAGAGATTAAGACCCTCGGAAGACTTCGCCATCCAAATCTTGTAACTTTGTTTGGTTACCATGCCAGTGAGACTGAGATGTTTCTGATATACAACTATTTGCCGGGTGGGAACCTGGAAAAGTTTATCCAGGAGAGGTCAACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTGGACATTGCCCGGGCGCTTGCCTACCTCCACGATACTTGTGTACCACGAGTCCTCCATCGCGATGTGAAGCCCAGCAACATACTGTTGGATGATGATTTCAATGCATACTTGTCTGACTTTGGATTGGCCAGACTTCTGGGAACTTCTGAAACCCATGCTACTACAGGGGTGGCGGGAACATTCGGTTATGTTGCGCCTGAGTATGCCATGACTTGTCGTGTTTCTGACAAGGCTGACGTGTACAGTTATGGTGTTGTACTTCTAGAGTTGCTCTCAGACAAGAAGGCATTAGACCCTTCATTTTCTTCCTATGGGAATGGCTTCAACATAGTAGCATGGGCATGCCTGCTACTTCGGCAAGGACGAGCAAAGGAGTTTTTCACAGCTGGGCTATGGGATGCAGGGCCAGAAGATGATTTGGTGGAGGTGTTGCACTTGGCCATTATGTGCACTGTCGATTCACTCTCGACGAGACCTTCGATGAAACAGGTTGTGCGAAGGCTAAAGCAACTTCAACCGCCATCATTCTAG 3426 0.4402 MFPSSCTSLIKWRFFHKPMPPLLLLEFYFLLLVLFPSCSDAFLADSDKSVLLHFKSSVSDPSGLLSSWNSAGDSNHCSWFGVLCDSNSRVLALNISGNGGGSNRSSSPCSDSAKFPLYGLGIRRSCDGSRGALSGKFSPLISKLTELRILSLPFNGFEGEIPPEIWGMGKLDVLDLEGNSITGSLPSHFDGLRNLRVLNLGFNNIVGEIPDSLARLESLEILNLASNGLNGSVPGFIGKLKGVSLMFNLLSGPIPLEIGDSCGRLEHLDLSGNFLVQRIPSSLGNCSQLRSLLLYSNLLEEVIPSELGQLQLLEVLDVSRNALSGPVPPEIGNCSELSVLVLSNLFNPLPEVNNTVRESSQLVSINDELNYFEGAMPVEITSLPKLRILWAPRATLEGRFPSSWGACDNLEMVNLAQNYFNGEFPNQLSGCKKLHFLDLSSNNLTGELAEELHVPCMTVFDVSGNILSGSIPEFFNGTCPSVPSWNGNLFELDNVSIPYMSFFSTKVHDGSLLTSAGEVGLSVIHNFGNNNFTGMQSLPIAHDRLAKKMGYVFLVGENKLTGPFPTNIFDKCDGLDALLLNVSYNRFSGQIPAKFGGMCGSLKFLDASGNRIAGPVPVGLGELVSLVSLNLGRNQLQGLIPASLGQMKNLVFLSMASNNLTGSIPTSLGQLYSLEVLDLSSNSLTGEIPKGFENLRNLTGLLLNNNKLSGHIPTGLANVTTLSAFNVSFNNLSGSLPSDNNLLKCSSAVGNPFLRPCHMLSLTTPSTDQQGPVADYNSNSAAAPETASKDSGSGFNSIEIASITSASAIVSVLIALIILFFYTRKWNSRSRVVGSTRKEVIVFTDIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDTCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRAKEFFTAGLWDAGPEDDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSF 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1758 1141 Gene3D Ribonuclease Inhibitor 452 764 IPR032675 -
Acco06g1758 1141 Gene3D Ribonuclease Inhibitor 242 451 IPR032675 -
Acco06g1758 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 982 994 IPR008271 GO:0004672|GO:0006468
Acco06g1758 1141 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Acco06g1758 1141 Gene3D Phosphorylase Kinase; domain 1 823 937 - -
Acco06g1758 1141 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Acco06g1758 1141 Pfam Leucine rich repeat 625 684 IPR001611 GO:0005515
Acco06g1758 1141 CDD STKc_IRAK 868 1136 - -
Acco06g1758 1141 PRINTS Leucine-rich repeat signature 434 447 - -
Acco06g1758 1141 PRINTS Leucine-rich repeat signature 671 684 - -
Acco06g1758 1141 SMART serkin_6 862 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1758 1141 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 361 1135 - -
Acco06g1758 1141 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Acco06g1758 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 938 1140 - -
Acco06g1758 1141 ProSitePatterns Protein kinases ATP-binding region signature. 868 890 IPR017441 GO:0005524
Acco06g1758 1141 Pfam Protein kinase domain 865 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1758 1141 MobiDBLite consensus disorder prediction 766 792 - -
Acco06g1758 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 826 937 - -
Acco06g1758 1141 SUPERFAMILY Protein kinase-like (PK-like) 844 1133 IPR011009 -
Acco06g1758 1141 SUPERFAMILY L domain-like 527 760 - -
Acco06g1758 1141 Gene3D Transferase(Phosphotransferase) domain 1 938 1139 - -
Acco06g1758 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 520 762 - -
Acco06g1758 1141 ProSiteProfiles Protein kinase domain profile. 862 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1758 1141 Gene3D Ribonuclease Inhibitor 44 241 IPR032675 -
Acco06g1758 1141 SUPERFAMILY RNI-like 133 488 - -
Acco06g1758 1141 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 239 494 - -
Acco06g1758 1141 SMART LRR_typ_2 168 191 IPR003591 -
Acco06g1758 1141 SMART LRR_typ_2 262 286 IPR003591 -
Acco06g1758 1141 SMART LRR_typ_2 671 694 IPR003591 -
Acco06g1758 1141 SMART LRR_typ_2 695 718 IPR003591 -
Acco06g1758 1141 SMART LRR_typ_2 310 334 IPR003591 -
Acco06g1758 1141 SMART LRR_typ_2 192 216 IPR003591 -
Acco06g1758 1141 SMART LRR_typ_2 623 646 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1758 Acco-ChrAcco06 12641140 12644565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1758 28 1140 Receptor kinase-like Gene Family AT3G02130 66.872 0.0 1424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Acco06g1758 Pkinase 7.7e-43 CL0016