Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1755 ATGAAGCAAAAACAGATCTTTCTTCATTTGGTGCTCATCATCTGCTACTTCATGGTGGCGCTCATGAGAGCAAGTAGTGGCATGGAAGTTGCAGAAGAAGAAGAAGAAGCTGATAGGATCGTGGAACTTCCTGGGCAACCGCAAGTGTCTTTCCAACAATTCTCAGGCTATGTCACTGTCAATCACGTTGCTGGTAGAGCCCTCTTTTACTGGCTCACTGAATCCCCACAAAACTCCTTCTCCAAGCCCCTCGTCATTTGGCTCAATGGAGGTCCCGGTTGTTCATCGGTGGCCTACGGAGCATCCGAGGAGATAGGCCCGTTCAGAATCAATAGGACTGCTTCAGGACTGTACCTTAACAAGTTCTCTTGGAACTCCGTCGCCAACCTTCTCTTCTTGGAGGCTCCGGCCGGTGTCGGCTTCTCCTACTCCAACCGCTCCTCCGACCTCTACGACACCGGCGACCACCGCACCGCGGAGGACTCTCTGGAATTCATAATAAGGTGGCTAGAACGATTCCCGAGGTACAAGAATCGGGAACTTTATATCAGTGGAGAGAGCTACGCAGGTCATTACGTTCCACAATTAGCAAGAGAAATCATCACGTATAATGCAAAAGCCAAGCACCCAATCAATATCAAAGGAATTTTGGTTGGGAATGCAGTGACGGACAACTACTATGATAACCTGGGGACGGTGGCGTACTGGTGGAGCCATGCTATGATCTCCGACCAGACTTACCGGCAGCTGATGAGCACGTGCGATTTCCACCGGCAAAAGGAATCCGATGAATGCGAGTCCTTGTATAGCTACGCAATGGACCAAGAATTCGGTAACATTGATCAGTATAACATCTATGCTCCTCCGTGCAACAACTCTGACGGCAGCTCCGCCACCACCCGCCGCTCCATGCGCCTGCCCCACCGTCCCCATCATCCGATGTTTAGGCAAATGTCTGGGTATGATCCCTGCACAGAGAAGTATGCTGAGATATACTACAACAGGCCAGATGTTCAGAAAGCACTCCATGCCAACACAACGGCCATTCCTTACAAGTGGACTGCTTGCAGTGAGGTTCTGAATCGAAATTGGAACGATACAGATGTGTCCATACTTCCCATTTACAGGGAGTTGATAGCACATGGAACCAGAGTCTGGGTTTTCAGTGGGGATGTTGATTCGGTTGTGCCAGTTACAGCAACTAGATATTCCCTTGCACAGCTTAAGTTGGCGACCAAGATTCCTTGGTACCCTTGGTACGTCAAAAAGCAGGTTGGAGGTTGGACAGAAGTGTACGAAGGGCTTACTTTTGCGACAGTAAGAGGGGCGGGTCATGAGGTGCCACTGTTCAAGCCCAGAGCTGCTCTCCAGTTATTCAAATCATTCATTGCAGGCAAGCCTCTTCCCAAGTCCTAA 1416 0.4993 MKQKQIFLHLVLIICYFMVALMRASSGMEVAEEEEEADRIVELPGQPQVSFQQFSGYVTVNHVAGRALFYWLTESPQNSFSKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFSWNSVANLLFLEAPAGVGFSYSNRSSDLYDTGDHRTAEDSLEFIIRWLERFPRYKNRELYISGESYAGHYVPQLAREIITYNAKAKHPINIKGILVGNAVTDNYYDNLGTVAYWWSHAMISDQTYRQLMSTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSATTRRSMRLPHRPHHPMFRQMSGYDPCTEKYAEIYYNRPDVQKALHANTTAIPYKWTACSEVLNRNWNDTDVSILPIYRELIAHGTRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFIAGKPLPKS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1755 471 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Acco06g1755 471 FunFam Carboxypeptidase 371 465 - -
Acco06g1755 471 Gene3D alpha/beta hydrolase 34 292 IPR029058 -
Acco06g1755 471 Gene3D - 324 361 - -
Acco06g1755 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Acco06g1755 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Acco06g1755 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Acco06g1755 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Acco06g1755 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 435 452 IPR033124 GO:0004185
Acco06g1755 471 Pfam Serine carboxypeptidase 44 464 IPR001563 GO:0004185|GO:0006508
Acco06g1755 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 452 IPR001563 GO:0004185|GO:0006508
Acco06g1755 471 Gene3D - 371 465 - -
Acco06g1755 471 SUPERFAMILY alpha/beta-Hydrolases 36 469 IPR029058 -
Acco06g1755 471 FunFam Carboxypeptidase 34 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1755 Acco-ChrAcco06 12610489 12615030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1755 329 468 Calmodulin-binding Proteins AT2G22960 31.206 9.00e-16 73.6