Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1752 ATGTCATCTGCAAAGCTTTTTATTGGAGGTGTTTCATATAGCACAGATGATATGGGTCTGAGAGAAGCCTTTGCTCGCTATGGAGAGATAATTGATGCAAGGGTTATTATGGATCGTGAGACTGGGAGGTCCAGAGGATTTGGATTCATAACTTTTGCATCAAGTGAGGAGGCATCTGCTGCTCTTCAGGCAATGGATGGTCAGGATCTTCATGGGCGGAGGATACGGGTAAACTATGCTACAGATAGGGCACGTCCAGGCTTTGGTGGTGGTGGGGGCGGCTATGGCGGGGGCGGTTATGGTGGGGGTGGCTATGGTGGGGGCTATGGTAGAAGTAACTACGGAGGTGATAATGACTTTAGGAGTCCAAGTTATGGAAGCGGCGGTGATGGCTTTGGGGTCAGTGGGAATTATGGAGCTCCTGACGGTGCTGAGGGCAGTAACTACCAATCCAGTCAAAACTTGGGTGGAGGAGATCTTGGCTTTGAACCAAGTGGAAATTCAAGTATGGGAGATGATGTTGGCCAATTCGGTAGCAACCAAAATGAAGGAACTGGCTTAGACGATGAAGATGATTTGAAAGAGAACAATGATGAAGACAACTTGAGAGAGAGCCGGTAG 621 0.4847 MSSAKLFIGGVSYSTDDMGLREAFARYGEIIDARVIMDRETGRSRGFGFITFASSEEASAALQAMDGQDLHGRRIRVNYATDRARPGFGGGGGGYGGGGYGGGGYGGGYGRSNYGGDNDFRSPSYGSGGDGFGVSGNYGAPDGAEGSNYQSSQNLGGGDLGFEPSGNSSMGDDVGQFGSNQNEGTGLDDEDDLKENNDEDNLRESR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1752 206 MobiDBLite consensus disorder prediction 144 158 - -
Acco06g1752 206 SUPERFAMILY RNA-binding domain, RBD 3 111 IPR035979 GO:0003676
Acco06g1752 206 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 2 157 - -
Acco06g1752 206 Gene3D - 1 158 IPR012677 -
Acco06g1752 206 MobiDBLite consensus disorder prediction 136 206 - -
Acco06g1752 206 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 82 IPR000504 GO:0003723
Acco06g1752 206 SMART rrm1_1 5 78 IPR000504 GO:0003723
Acco06g1752 206 CDD RRM2_NsCP33_like 5 80 - -
Acco06g1752 206 MobiDBLite consensus disorder prediction 169 184 - -
Acco06g1752 206 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 76 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1752 Acco-ChrAcco06 12591751 12593339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1752 3 81 Eukaryotic Initiation Factors Gene Family AT1G49760 35.443 1.23e-11 61.2