Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1746 ATGCCTAACCGGGCATTACCAAAAATATGCCTCAACGGATCGTCATGCACCGATCTACGAAGGCAAAACCCTAAATGGGATCACCCTGGTCCATATAAAACACTGAAGACCCCTTTAAAACCTAGAGTTAGAAGGGAGGGCGCGAGTCGACGAGAGCTTCATCGTTTTGAGCATCGGAGCTGCTTCTCGTTCTCTCCCCGGGATTTAGTTATGGAAGCTGCCAGAACCGTGAAGGACGTTTCACCGCATGAGTTCGTCAAGGCTTACTCCGCTCACCTCAAGCGCTCTGGCAAGATGGAGCTTCCTGAGTGGACGGATTTAGTAAAAACTGCAAGATTTAAAGAACTTGCCCCTTACGATCCTGACTGGTATTATGTTAGAGCTGCCTCCATGGCAAGAAAGATTTACTTGAGAGGTGGTCTCGGTGTCGGTGCCTTCCAAAGAATTTACGGTGGGAGCAAGAGGAATGGAAGTCGCCCCCCACATTTCTGCAAGAGCAGTGGAGCCATTGCCAGACACGTTCTTCAGCAGTTGCAAAACATGAACATTATTGAGCTTGATCCAAAAGGAGGTAGGAAAATCACTTCAAGTGGTCGAAGGGATCTTGACCAAGTTGCTGGGCGAATTGTGGTTGCTCCATGA 642 0.4875 MPNRALPKICLNGSSCTDLRRQNPKWDHPGPYKTLKTPLKPRVRREGASRRELHRFEHRSCFSFSPRDLVMEAARTVKDVSPHEFVKAYSAHLKRSGKMELPEWTDLVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHVLQQLQNMNIIELDPKGGRKITSSGRRDLDQVAGRIVVAP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1746 213 ProSitePatterns Ribosomal protein S19e signature. 160 179 IPR018277 GO:0003735|GO:0005840|GO:0006412
Acco06g1746 213 FunFam 40S ribosomal protein S19 72 213 - -
Acco06g1746 213 Gene3D - 60 212 IPR036388 -
Acco06g1746 213 SMART Ribosomal_S19e_2 76 212 IPR001266 GO:0003735|GO:0005840|GO:0006412
Acco06g1746 213 PANTHER 40S RIBOSOMAL PROTEIN S19 71 209 IPR001266 GO:0003735|GO:0005840|GO:0006412
Acco06g1746 213 SUPERFAMILY "Winged helix" DNA-binding domain 76 211 IPR036390 -
Acco06g1746 213 Pfam Ribosomal protein S19e 76 210 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1746 Acco-ChrAcco06 12515158 12516979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1746 71 212 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 83.099 6.34e-90 259