Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1742 ATGTCTATGGCAGTCGGATCGATTGCTCTATTACCTCGTCCTGATTTGATTGTCAGACCTTGGTTCCATTCGACGCATGCTGTTATTTCTGCTATTCAATCTTCGTCGCGTAATTGGAAACAGTACATCTTCATCTTTTCCTCCGCACCACTCAGTCCCATCCATACCCAGTCTCCTTATGAAATTGAAAATCCAATGGAACACACCACCGTGCCTGAATTGCAGCCAAATCCAGCGCCTGCATCCCTTCCTTCCTACCCTCCTGCTGTAGCCGCTTACCTTCCCGCATCCTATCCTCCCCATTACCAATTGTACTGTCAAAACCCTAATCCTCCTTCTGCAGACCCTCAATCTTCTTCTGGAACCCAAGAATTTCATGGTGGCTCGGGTGCGGAACCTGGGTTGAACCCTCCTGGTGTTACTTCCTATGAACCCGTGACCTCCGGCTCAGTTGGCCATCTGACTCATGAAGCCCATGCTAATTACTCGTATGCTCACAACCCTGTTGCAGATTCGAGCTCCGGATACTATTATGATCCAAATGCTCAGAATTGGGCTGCTAGGGAGGCTGTTATGCAGTTCGGGGTGGACCCAGCTGGCTATGGAGCTGCTATCCCCGTGGCCTCAACTGGATCAGAGCAATTGGCTACCGCAAATACCAACTCGGCTTGGTGGACTAACACCACAACCCAACCTCAGGTAAATGGGGCACGGAAGAAACCTAAGAAACTGAAAATTAAGGTTGTCCAATCTGCATATTGTGAAGTTTGCAAGATAGATTGTACCAGCAAGGATGTTCTGGACCAGCATAAGTTAGGAAAGAAGCACAAGAAGAACTTAGAGAAACTAAAAGAAGCATTAAGGCCGCCGCCGCCGCCACCTCAAGTTCCTGTTCTACCCGACGCTTCATCTAGTCCTGTGATAGGACCTCAGCCTGAGGGGAGCAAATCTGGTGCTGGGAGTAAGAAAAAAAGGAAAGCAACTCAAACACCAGCTGATTTGGAGAACAAGACAAAGAAGGTTCTTGAAGGTGGGGCTGCTGCTGCAGCAGTTAAAATATGTACTATTTGTAATGTGGTCTGTAATAGCGAGACGGTATTTAATTATCATCTTGCCGGGCAAAAGCATGCTGCTATGTTGAAGAAACAAGCTTCTTAA 1158 0.4767 MSMAVGSIALLPRPDLIVRPWFHSTHAVISAIQSSSRNWKQYIFIFSSAPLSPIHTQSPYEIENPMEHTTVPELQPNPAPASLPSYPPAVAAYLPASYPPHYQLYCQNPNPPSADPQSSSGTQEFHGGSGAEPGLNPPGVTSYEPVTSGSVGHLTHEAHANYSYAHNPVADSSSGYYYDPNAQNWAAREAVMQFGVDPAGYGAAIPVASTGSEQLATANTNSAWWTNTTTQPQVNGARKKPKKLKIKVVQSAYCEVCKIDCTSKDVLDQHKLGKKHKKNLEKLKEALRPPPPPPQVPVLPDASSSPVIGPQPEGSKSGAGSKKKRKATQTPADLENKTKKVLEGGAAAAAVKICTICNVVCNSETVFNYHLAGQKHAAMLKKQAS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1742 385 PANTHER ZINC FINGER PROTEIN 385B-LIKE 106 384 - -
Acco06g1742 385 MobiDBLite consensus disorder prediction 105 126 - -
Acco06g1742 385 SUPERFAMILY beta-beta-alpha zinc fingers 351 383 IPR036236 -
Acco06g1742 385 MobiDBLite consensus disorder prediction 284 336 - -
Acco06g1742 385 Pfam Zinc-finger of C2H2 type 353 376 - -
Acco06g1742 385 Pfam Zinc-finger of C2H2 type 253 276 - -
Acco06g1742 385 SUPERFAMILY beta-beta-alpha zinc fingers 248 284 IPR036236 -
Acco06g1742 385 MobiDBLite consensus disorder prediction 286 300 - -
Acco06g1742 385 MobiDBLite consensus disorder prediction 105 150 - -
Acco06g1742 385 Gene3D Classic Zinc Finger 321 384 - -
Acco06g1742 385 Gene3D Classic Zinc Finger 233 283 - -
Acco06g1742 385 SMART ZnF_U1_5 349 383 IPR003604 GO:0003676|GO:0008270
Acco06g1742 385 SMART ZnF_U1_5 249 283 IPR003604 GO:0003676|GO:0008270
Acco06g1742 385 SMART c2h2final6 252 276 IPR013087 -
Acco06g1742 385 SMART c2h2final6 352 376 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1742 Acco-ChrAcco06 12498399 12500343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1742 248 380 C2H2 Transcription Factor Family AT5G61190 35.075 4.30e-13 69.3