Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1724 ATGGCCGCGAAGAACGGCGGATCAGCGACGGCGCAACCGCCACGCCCGACGATCACTCTCCCGCCTCGCCCTTCCATGGAGGTCTTCTTCACTGGTGGCCTAGGCGCTAGCCCTGGCCCGATGACCCTCGTATCCAGCTTCTTCTCTGATAATTATCCTGACTCTGACTGTCGGTCGTTTTCTCAGTTGCTCGCCGGAGCTATGGCTTCTCCGCTTGCTCGCGGTCCGAGGCCTGGCTTCTTTCCGGATAATTTGACCGACAATTACTCCAAAGAAGCTACTGCTGACGATGGGGTCCAAAAGAATTCGGGTTTCAAGCAGAGTAGGCCCATGAATCTGGCTATTGCTCATTCACCATTGTTTACCGTTCCACCTGGGTTAAGCCCTTCTGGGTTGCTCAACTCACCGGGCTTCTTTCCACCGCAGAGCCCCTTTGGGATATCCCATCAGCAGGCTTTGGCACAGGTTCAAGCTCAAGCTGTCTTGGCACAATCTCATATGCACATGCAAGGTGATCATCAACAATCTGCCATATCGGCTCCTGGTGAACCATTGGCACAGCAGCCATCTTTTGTTCCAAGTGAAGCTTCAGACCAGCAAGTGGCACCATCTGCATCAGATTCTAAAAGTGCTCAAATGGAGACTTCAGATGTTTCTCACACTGATAGGAAATACCAACTTTCTTCCTTAGCCATTGACAAACCTGCAGATGATGGCTACAATTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGGAGTGAGTACCCACGGAGCTACTACAAGTGCACACATCTGAATTGCCCAGTAAAGAAAAAGGTTGAACGTGCCCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAACTGCCTCAGCCAAACAAGCGTATCAAAGATAATTCTGATTTAAATGGAAATACAAGTGTTCAAGTTCAGTCTGACTTGACTACACAAGGATGGGTGGGAAATTCAAACAAGTTTGGTGAAAGCATGACTGATCATTCAGTGCCAGAAAGTGATCCTTCATCCAGTCAAGGTGCTCTCAAGCAACAACCTGGATCAAGTGAGAGTGAGGAAGGGGGTGATGCTGATACAAGGGAAGAGGAGGGAGATGTCAGTGAGCCAAACCCCAAGAGAAGGAACACTGATCTTGGGGCTTCTGAAGTACCTATGTCTCACAAGACTGTCACGGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTCTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAAAAAGTGGTAAAGGGAAATCCCTATCCAAGGAGTTATTACAAATGCACTAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGGGCTTCAACAGACCCCAAAGCTGTCATAACTACCTATGAAGGAAAACATAATCATGATGTTCCTGCTGCTAAAACCAGCAGCCACAACACAGCTAATAACAATTCAATGCAAGTAAAACCACAGAGAGTGGTGCCTGAGAAGCATCCCTTGCTCAAAGATATGGATTTTGGAAATAATGATCAAAGACCAGTCGCGTTACGCTTTAAAGAAGAGCAAATCATAGTATAG 1593 0.4746 MAAKNGGSATAQPPRPTITLPPRPSMEVFFTGGLGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLARGPRPGFFPDNLTDNYSKEATADDGVQKNSGFKQSRPMNLAIAHSPLFTVPPGLSPSGLLNSPGFFPPQSPFGISHQQALAQVQAQAVLAQSHMHMQGDHQQSAISAPGEPLAQQPSFVPSEASDQQVAPSASDSKSAQMETSDVSHTDRKYQLSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHELPQPNKRIKDNSDLNGNTSVQVQSDLTTQGWVGNSNKFGESMTDHSVPESDPSSSQGALKQQPGSSESEEGGDADTREEEGDVSEPNPKRRNTDLGASEVPMSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHNTANNNSMQVKPQRVVPEKHPLLKDMDFGNNDQRPVALRFKEEQIIV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1724 530 FunFam WRKY transcription factor 33 403 469 - -
Acco06g1724 530 MobiDBLite consensus disorder prediction 287 400 - -
Acco06g1724 530 SUPERFAMILY WRKY DNA-binding domain 408 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 MobiDBLite consensus disorder prediction 473 497 - -
Acco06g1724 530 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 Gene3D WRKY domain 221 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 Gene3D WRKY domain 401 477 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 FunFam WRKY transcription factor 223 296 - -
Acco06g1724 530 MobiDBLite consensus disorder prediction 301 362 - -
Acco06g1724 530 MobiDBLite consensus disorder prediction 1 24 - -
Acco06g1724 530 MobiDBLite consensus disorder prediction 190 215 - -
Acco06g1724 530 MobiDBLite consensus disorder prediction 164 183 - -
Acco06g1724 530 MobiDBLite consensus disorder prediction 478 495 - -
Acco06g1724 530 ProSiteProfiles WRKY domain profile. 411 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 SMART WRKY_cls 416 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 Pfam WRKY DNA -binding domain 417 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 SUPERFAMILY WRKY DNA-binding domain 234 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1724 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 136 492 IPR044810 GO:0003700
Acco06g1724 530 MobiDBLite consensus disorder prediction 164 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1724 Acco-ChrAcco06 12368795 12373041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1724 15 528 WRKY Transcription Factor Family AT2G03340 53.571 3.07e-156 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g1724 WRKY 1.3e-25 CL0274