Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1723 ATGGGTTGCATTAACTCCAAAAATGTGGTTGCCGGAGATTCACCCAAGCACCCGAAGGTGCGCACCGACAATGGGTTTCCTATTGTGGAGGCTCCGTCCAGATCCCGATCGTGGATGTTAGCTTCTGCCAGTAAAAGGGATCGAAAATCGGAGGACAGCAATCGAGATGGAAAAAAGTCCGGGAAGCATAGCTGCAAAGGAGGCGGGAATTACAGTTTGAAGATGGAACTTTCGCATCGGTCCGTGGAAGCAGAGCTGAATGCGGCTGGATGGCCCCCTTGGCTATCAGCTGCTGCCGGCGAAGCTATTCATGGATTGGTGCCCCTCAGAGCAGATGCTTTTGAGAAATTAGAGAAGATTGGACAAGGTACATATAGCAGTGTGTTTCGAGCACGTGAAGTTGAAACTGGGAGGATGTTTGCCTTGAAGAAGGTGCGGTTTGACAATTTTCAGCCTGAGAGCGTGAGGTTCATGTCAAGGGAAATTACAATTCTTCGCAGGGTTGACCATCCAAACGTCATGAAATTGGAGGGTGTAATTACATCCCGACTATCAAGTAGTTTATACCTGGTGTTTGAATATATGGAGCATGATCTCGCGGGACTAGTATCTTGTCCTGATATAACGTTCACTGATTCACAGGTGAAATGTTACATGAGGCAACTACTGTGTGGACTTGAGCACTGTCACCTGCGTGGTATCATCCATCGAGACATTAAAGTATCCAATATATTAGTAAATAATGATGGGATACTCAAGATAGGCGATTTTGGGTTGGCAAATACAATTAGCTCAAGCAACAAGCATCCATTAACCAGTCGCGTAGTGACTCTATGGTACCGTCCTCCTGAACTCTTGATGGGATCAACCAACTATGGATTATCAGTGGACCTATGGAGTGTGGGATGTGTGTTTGGCGAATTTTTTCTAGGGAAACCTATCCTCAAGGGGAGAACTGAGGTTGAACAATTGCACAAAATTTTTAAGCTTTGCGGTTCACCACCTGAAGAATTCTGGAAAAACTGCAAGCTTCCTCATGCAATAATGTTTAAACCTCAGACTACTTACGAAGGCTCTTTTTCGGGTAGGTTTCAAGGTATTCCAGAAACTGCTCTAAACCTAATGAAGACTCTACTATCCTTTGATCCCCATGAGCGTGGGACTGCCTCTTCTGCTCTGATTTCTGAGTATTTCAGCACCAAGCCGCTTGCTTGCGACCCTTCACGGCTGCCAAAATATCCACCCAGAAAAGAAATGGATGCTAAGAATCGAGAAGACGTCCGCAGGAAAAAGACTGACGGTAAAGTGCACGAAGCTGCGACATCAAGAAAGCAAAGAAGAGTCCGTAAAGTCCTACAAGAACCAAACAATTTCTGTAACCCAGCTTCAACCGATGAAAAGCAGAACAATTCTCAAAAAGCTGTAAAAGACGATGTTAAAACAAATTTTAACAGGGGAAAGGGAGGAGCTATGCATAGGGAACCATCAAAGCCTTCAACGGAAGCATTGTCAGAGACCTTCCAGATCAATGGCGTACCTCATGGCTTCAGTATATTAGCAGGACCACCACCAGCCTCAGGTGCTAGTGGCTTTGCATGGGCAAAAAGGAGAAAACCAGAGGCTTCATCCACATTATCAGATGGTTCAAAAAGCAAAATTAGCGCCCTGGATCCAACCTTTGCAAGAGGCACATATGATTTAACCAGACATGTGATGGATGTCGCAGAAAGAAAATATAAGGACAACACAAGCCATCAGGCTCGGCATATTCGACATGAACATGTTGATGCATCTGACAAATATTCCACGCAAAAACCAGATGGTGTGGTGAATACTCAGGGCCACAAAAGACTTGGCAATGAAATCACACGCCATGCAGCTGGGAAATCCAGATTGGGAAGCCGGTTTCGAGTCACAGGTGTTCAGGTTTTGCGAACAGTGTACCAATATTTGAAAATGGATGGATCTGCTCGTGTTAGTACTGGTGTGGACGCGTATCTACCAAATTATAAATTAGGGAAAACACTTGGTATTGGAGCCTTCGGCAAGGTGAAAATTGCAGAGCATGTTCTGACACGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAAGTAAAGAACATGGACATGGAAGAAAAAGTGAGAAGGGAAATCAAAATTTTGAGATTGTTCATGCATCCTCACATCATACGACTTTATGAAGTCATAGAAACCCCAACAGACATATTTGTTGTGATGGAGTATGTGAAATCTGGAGAGCTCTTTGACTACATAGTGGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTATTTTTTTCCAGCAGATAATCTCTGGAGTGGAGTACTGTCACAGGAACATGGTGGCTCATAGAGACTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAAAGCAGTGTCAAGATTGCAGATTTTGGTCTGAGCAACGTCATGATTGATGGTCACTTCCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGAAAATATTATGCTGGGCCTGAAGTGGATGTCTGGAGCTGTGGTGTAATTTTATATGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAATATTCCAAACCTTTTCAAGAAAATAAAGGGTGGGATATATACTCTTCCTAGTCATTTATCACCTGGTGCTAGAGATCTGATACCCAGGATGCTTGTGGTTGATCCTATGAAAAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTTCCACCGCCTGATACTTTACAACAAGCCAAAAAGATTGATGAGGAAATTCTTCAGGAAGTGGTTACTATTGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGATACAAAATGAGGCTACTGTGACATATTATTTGCTATTGGACAATCGATTCCGTGTTTCAAGCGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTATAATCGTATGCATCCTGCTGAAGTTGCTGCGGTTGCAAACCGCTTTCCAGGAGGGTATATGGATTATCAAGGAGTTGGATTGAGGCCACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGGGCCCATCCTCGTGAAATAATGACTGAGGTACTTAAAGCTCTGCAAGAATTGAATGTGTGCTGGAAGAAGATTGGACGCTATAACATGAAGTGCCGCTGGGTTGCTGGCATTCTGGGTCATAGTGAAGAAATGATGAACAATCATAATCATTACTTTGGAGATGATTCCGCTATTATTGAGAATGACGTGGTTTCTAAGTCAAACGTAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTCCAAAGGGTCCATGGCCCACAGTTTCTCTTTTTGGATCTTTGTGCTTCTTTCCTGGCACAGCTTCGTGTCCTCTAG 3486 0.4398 MGCINSKNVVAGDSPKHPKVRTDNGFPIVEAPSRSRSWMLASASKRDRKSEDSNRDGKKSGKHSCKGGGNYSLKMELSHRSVEAELNAAGWPPWLSAAAGEAIHGLVPLRADAFEKLEKIGQGTYSSVFRAREVETGRMFALKKVRFDNFQPESVRFMSREITILRRVDHPNVMKLEGVITSRLSSSLYLVFEYMEHDLAGLVSCPDITFTDSQVKCYMRQLLCGLEHCHLRGIIHRDIKVSNILVNNDGILKIGDFGLANTISSSNKHPLTSRVVTLWYRPPELLMGSTNYGLSVDLWSVGCVFGEFFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKNCKLPHAIMFKPQTTYEGSFSGRFQGIPETALNLMKTLLSFDPHERGTASSALISEYFSTKPLACDPSRLPKYPPRKEMDAKNREDVRRKKTDGKVHEAATSRKQRRVRKVLQEPNNFCNPASTDEKQNNSQKAVKDDVKTNFNRGKGGAMHREPSKPSTEALSETFQINGVPHGFSILAGPPPASGASGFAWAKRRKPEASSTLSDGSKSKISALDPTFARGTYDLTRHVMDVAERKYKDNTSHQARHIRHEHVDASDKYSTQKPDGVVNTQGHKRLGNEITRHAAGKSRLGSRFRVTGVQVLRTVYQYLKMDGSARVSTGVDAYLPNYKLGKTLGIGAFGKVKIAEHVLTRHKVAIKILNKRKVKNMDMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIFVVMEYVKSGELFDYIVEKGRLQEDEARIFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKSSVKIADFGLSNVMIDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTLQQAKKIDEEILQEVVTIGFDRNQLVESLRNRIQNEATVTYYLLLDNRFRVSSGYLGAEFQESMDTGYNRMHPAEVAAVANRFPGGYMDYQGVGLRPQFPAERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGRYNMKCRWVAGILGHSEEMMNNHNHYFGDDSAIIENDVVSKSNVVKFEMQLYKTREEKYLLDLQRVHGPQFLFLDLCASFLAQLRVL 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1723 1161 MobiDBLite consensus disorder prediction 456 475 - -
Acco06g1723 1161 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 943 983 IPR015940 -
Acco06g1723 1161 MobiDBLite consensus disorder prediction 411 445 - -
Acco06g1723 1161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Acco06g1723 1161 Gene3D Kinase associated domain 1, KA1 1045 1159 - -
Acco06g1723 1161 FunFam Non-specific serine/threonine protein kinase 1045 1159 - -
Acco06g1723 1161 CDD AMPKA_C 1039 1158 - -
Acco06g1723 1161 MobiDBLite consensus disorder prediction 408 445 - -
Acco06g1723 1161 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 1112 1160 IPR001772 -
Acco06g1723 1161 SUPERFAMILY Protein kinase-like (PK-like) 109 403 IPR011009 -
Acco06g1723 1161 FunFam probable serine/threonine-protein kinase At1g54610 197 437 - -
Acco06g1723 1161 CDD UBA_SnRK1_plant 944 984 - -
Acco06g1723 1161 CDD STKc_AMPK_alpha 667 922 - -
Acco06g1723 1161 FunFam Non-specific serine/threonine protein kinase 661 1000 - -
Acco06g1723 1161 Pfam Protein kinase domain 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1723 1161 Pfam Protein kinase domain 670 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1723 1161 CDD STKc_CDK9_like 114 398 - -
Acco06g1723 1161 SMART uba_6 945 982 IPR015940 -
Acco06g1723 1161 Pfam UBA/TS-N domain 944 980 IPR015940 -
Acco06g1723 1161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Acco06g1723 1161 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 589 926 - -
Acco06g1723 1161 SUPERFAMILY Protein kinase-like (PK-like) 667 940 IPR011009 -
Acco06g1723 1161 Pfam Kinase associated domain 1 1118 1160 IPR001772 -
Acco06g1723 1161 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Acco06g1723 1161 Gene3D Transferase(Phosphotransferase) domain 1 661 1002 - -
Acco06g1723 1161 Gene3D Phosphorylase Kinase; domain 1 106 196 - -
Acco06g1723 1161 FunFam probable serine/threonine-protein kinase At1g54610 101 196 - -
Acco06g1723 1161 SUPERFAMILY KA1-like 979 1160 IPR028375 -
Acco06g1723 1161 Gene3D Transferase(Phosphotransferase) domain 1 197 438 - -
Acco06g1723 1161 ProSiteProfiles Protein kinase domain profile. 670 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1723 1161 MobiDBLite consensus disorder prediction 41 63 - -
Acco06g1723 1161 FunFam Non-specific serine/threonine protein kinase 658 749 - -
Acco06g1723 1161 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1723 1161 MobiDBLite consensus disorder prediction 1 70 - -
Acco06g1723 1161 ProSitePatterns Protein kinases ATP-binding region signature. 676 699 IPR017441 GO:0005524
Acco06g1723 1161 SMART serkin_6 670 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1723 1161 SMART serkin_6 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1723 Acco-ChrAcco06 12347160 12366233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1723 674 912 Core Cell Cycle Gene Families AT5G10270 27.986 1.43e-23 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Acco06g1723 Pkinase 1.6e-67 CL0016