Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1719 ATGGCACCTCGTGTAATCACGGTTTCAAAGACCGGAAGCGGAGACTATCGGACGGTGCAGGAAGCAATTGATTCCGTTCCAATGGGAAACAACTGTCGGACCGTGATTCGAGTGTCTCCGGGAATCTACAAGCAACCAGTTTACGTACCCAAGACTAAGAATTTCATCACCCTTGCTGGTCTGTGCCCCGAGGATACTGTGCTTACCTGGAATAATACCGCCACTAAAATCGAACACCACCAGGCTGCTCGTGTAATAGGCACTGGTACTTTTGGCTGTGGTAGTACCATTGTGGAAGGAGAGGATTTTATTGCCGAGAACATCACGTTCGAGAATTCCTCCCCTCAGGGTTCAGGGCAAGCTGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTATAACTGCAGGTTCCTAGGATGGCAGGACACTCTGTACTTACACTATGGCAAACAGTACTTGAAAGATTGTTACATTGAAGGGAGCGTGGACTTTATTTTTGGCAATAGCACTGCTCTTATGGAACATTGCCATATTCACTGCAAGGCTCAAGGCTTCATAACTGCACAGAGCAGAAAATCTTCTCATGAAACAACTGGTTATGTATTCTTAAGATGTGTCATAACGGGTAATGGAGATACTTCATATGCATATCTTGGACGCCCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATACACTTATATGGATCGATGTATAAGGCCTCACGGCTGGAATAATTGGGATAAAGTTGAGAATGAGAGAACTGCTTGCTTTTATGAATACAGGTGTCATGGACATGGTTGCTGTCCATCCAAACGAGTAGCATGGGCTAGAGAATTGATGGATGAAGAAGCAGGGCAGTTCCTATCACATACTTTCATTGACCCAGATGCTGATAGACCTTGGCTTGCTCAAAGAATGGCTTTGAAGATTCCATATTCTGCTTAG 951 0.4532 MAPRVITVSKTGSGDYRTVQEAIDSVPMGNNCRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTATKIEHHQAARVIGTGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALMEHCHIHCKAQGFITAQSRKSSHETTGYVFLRCVITGNGDTSYAYLGRPWGPFGRVVFAYTYMDRCIRPHGWNNWDKVENERTACFYEYRCHGHGCCPSKRVAWARELMDEEAGQFLSHTFIDPDADRPWLAQRMALKIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1719 316 Gene3D - 2 310 IPR012334 -
Acco06g1719 316 FunFam Pectinesterase 2 309 - -
Acco06g1719 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Acco06g1719 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Acco06g1719 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Acco06g1719 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1719 Acco-ChrAcco06 12307957 12311713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1719 4 309 Carbohydrate Esterase AT5G47500 39.557 5.81e-71 222