Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1711 ATGGAGAGATCTTCAGGAGTGAGAGCTGGAAGATGGTGCAAAGAAGAAGATGATCTTCTCAAGGCCTGTGTTCTAAACTATGGTGAAGGAGAATGGCATCTTGTTCCTGAAAGATCAGGCTTGAAAAGGTGCAGAAAAAGCTGTAGGCTGAGGTGGTTAAGCTATCTAAAACCAGATATCAAAAGGGGAGGCTTCTCTGAGGATGAAATTGATATGATGATCAGGCTTCACAAGCTATTGGGAAACAGATGGTCATTGATAGCTAGAATGCTTCCTGGAAGAACAGCAAATGGTGTGAAGAACTACTGGAACAGCCATATGCGTAAGAAGGGACAACGTGGTTTATCTGATAAGGAGAGAGAGGTAGAAGAAAAAGCGGAGGATCAAACAAAAGCCATTAGAAGCCATACAACAACAGTAATAAAACCTCGAGCTTTGAGGTTATCGAGAAGCTCGTGGTCTTGGTGCAGAAATAATAATAATACTGATAACGATGGAGCTGGTTGTGAAGTAAGCGAAGACATAAGTACAAAACGTTGTAGGCCACATCGTGATGAAGAGCAAAACCAGCAGGAGGGAGACGAGGAGTCGACGGAGTGGTGGCAATGCTTGCTTTTTGATGACAGTGACAACATTATTGACAAGGCAGGTCATCATGATTACCAACAAATTGGTTCATCATTATCATCGTCATCTACGTCCAAGGATCAACATGACAAGTTTGATCAATTCTGGGATCAGCAACTTACTTGGATTGATGACTTTCCTCTACACACATCTCTCGCGGATTTTCTCGCTTAA 801 0.4257 MERSSGVRAGRWCKEEDDLLKACVLNYGEGEWHLVPERSGLKRCRKSCRLRWLSYLKPDIKRGGFSEDEIDMMIRLHKLLGNRWSLIARMLPGRTANGVKNYWNSHMRKKGQRGLSDKEREVEEKAEDQTKAIRSHTTTVIKPRALRLSRSSWSWCRNNNNTDNDGAGCEVSEDISTKRCRPHRDEEQNQQEGDEESTEWWQCLLFDDSDNIIDKAGHHDYQQIGSSLSSSSTSKDQHDKFDQFWDQQLTWIDDFPLHTSLADFLA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1711 266 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Acco06g1711 266 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Acco06g1711 266 Gene3D - 2 62 - -
Acco06g1711 266 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 219 - -
Acco06g1711 266 MobiDBLite consensus disorder prediction 175 195 - -
Acco06g1711 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Acco06g1711 266 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Acco06g1711 266 MobiDBLite consensus disorder prediction 175 190 - -
Acco06g1711 266 CDD SANT 11 56 IPR001005 -
Acco06g1711 266 FunFam Myb transcription factor 9 61 - -
Acco06g1711 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Acco06g1711 266 CDD SANT 65 107 IPR001005 -
Acco06g1711 266 SMART sant 61 109 IPR001005 -
Acco06g1711 266 SMART sant 8 58 IPR001005 -
Acco06g1711 266 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Acco06g1711 266 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Acco06g1711 266 Gene3D - 63 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1711 Acco-ChrAcco06 12256724 12258088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1711 2 149 MYB Transcription Factor Family AT1G66370 56.494 7.67e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g1711 Myb_DNA-binding 4.4e-11 CL0123