Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1687 ATGCACAGCTTGAACACTGAAACAAATCAGCCGCAAAACCCTGCTGCCCAGAACCAATGTGCCGGGGAGCACTCCATTGCAAGACTTGTAGACAGTTACCCTCCTGGTTTTCTCAGGAAGGTGTTGGCAGAGCTAATAGGGACATATCTATTGGTGTTTGTGACAAGTGGGACGGCTGCACTTAGTTCTGTTGATGACAAGAAAGTATCACAACTAGGAGCTGAACTTGCAGCCGGATTCATTGTCATGGTCATGGTCTATGCCACCGGTCACATCTCCGGCGCCCATATAAACCCAGCTGTCTCCATAGCTTTCGCCGCTGCCGGTCATTTCCCTTGGAAACAGGTCCCATTTTACGTGGATGCTCAAGCTCTTGTCATGGAGATCCTCATCACTTTCATTCTCATGCTCGTTATCTGCGCTGTCACCACTGATTCCAAAGCTGTTGGAGACCTGGCAGGGGTTGCAATAGGCTTTTCAGTGGGCATAGGAAACATCCTTGGAGGGCCAATATCGGGCGGATCGTTGAATCCAGCAAGAACATTGGGTCCAGCAATAGCAAGTGGGTCCTACAAAGGAATTTGGGTTTATCTGGTTGGACCCACTATTGGGGCCATTTTAGGGGCATGGGCCTACAGTGCTATCCAAGACAATGATAATAACTCTGCTCCCTCCATTGACCTAACCTCATTTATATCCGAGCTACGCTTCATGAATGATAAGGAAGCTAATGAGCAAGACGACCCACGCGTCATGCGTCCGAACAGTGTTTAA 774 0.4897 MHSLNTETNQPQNPAAQNQCAGEHSIARLVDSYPPGFLRKVLAELIGTYLLVFVTSGTAALSSVDDKKVSQLGAELAAGFIVMVMVYATGHISGAHINPAVSIAFAAAGHFPWKQVPFYVDAQALVMEILITFILMLVICAVTTDSKAVGDLAGVAIGFSVGIGNILGGPISGGSLNPARTLGPAIASGSYKGIWVYLVGPTIGAILGAWAYSAIQDNDNNSAPSIDLTSFISELRFMNDKEANEQDDPRVMRPNSV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1687 257 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Acco06g1687 257 PANTHER AQUAPORIN NIP2-1 121 219 IPR034294 -
Acco06g1687 257 SUPERFAMILY Aquaporin-like 33 217 IPR023271 -
Acco06g1687 257 PRINTS Major intrinsic protein family signature 158 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1687 257 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1687 257 PRINTS Major intrinsic protein family signature 195 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1687 257 PRINTS Major intrinsic protein family signature 127 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1687 257 CDD MIP 39 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1687 257 Gene3D Glycerol uptake facilitator protein. 2 123 IPR023271 -
Acco06g1687 257 Gene3D Glycerol uptake facilitator protein. 124 224 IPR023271 -
Acco06g1687 257 Pfam Major intrinsic protein 122 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1687 Acco-ChrAcco06 12067802 12069956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1687 39 248 Major Intrinsic Protein MIP AT5G37820 41.152 1.37e-58 187