Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1686 ATGCAAATGACAAGTCAAACTATGTGGAGCTTCAATCCTGAAAGAGAGCAGCCGGACGACCCAAGAACCCATAAACGACCTTTTCTTCTTCTTCCCTTTGCAAAACTTGCACAGAATTATCCTCCTGGTTTTTTTCGACAGGTATTGGCAGAGATTAAAGGAACATATCTGTTGGTGTTTGTGGGAAGTGGGTCGGCTGCTCTTAATGCTAATGATGAGCAGAAAATATCAAAACTAGGAGCTTCACTTGCAGGAGGATTCATAGTGATTGTGATGATCTATGCCATCGGACACGTCTCTGGTGCTCACATGAACCCAGCTGTGTCCTTAGCTTTTGCATCTGTGAAGCATTTTCCATGGAAACAGGTCCCATTATACGTGGCAGCACAATTGATGGGAGCCATTTCTGCCTCGTTTACGTTGCGGCTGATATTGGACCCAATAAAACAACTTGGGACAACCTCACCTTCTGGAAGTGATGCTCAAGCCCTCGCAATGGAGATAGTCGGAGAGCTCGCAGGAGTCGCAGTAGGCTCTTCAGTATTCATAGCGGGCATCCTTGCAGGACCTATATCTGGGGGATCAATGAACCCGGCAAGAACAATTGGTCCTGCAATAGCAAGTGGTTCCTATAAAGGACTTTGGGTCTATCTGGTGGGGCCGGTTACTGGGGCACTTTTGGGAGCATGGTCTTACACTACTATTAAAGAGACAAATGAACCAGCTCCGGCCACTTCACTGATATCATTTCCCTTCGAGCTACGCACGAGGAATGGGGAAATAGAGAATGTTAAAAGCAAAGACAACCCACAAATTATGAGTGAAAATAATGTTTAA 837 0.4564 MQMTSQTMWSFNPEREQPDDPRTHKRPFLLLPFAKLAQNYPPGFFRQVLAEIKGTYLLVFVGSGSAALNANDEQKISKLGASLAGGFIVIVMIYAIGHVSGAHMNPAVSLAFASVKHFPWKQVPLYVAAQLMGAISASFTLRLILDPIKQLGTTSPSGSDAQALAMEIVGELAGVAVGSSVFIAGILAGPISGGSMNPARTIGPAIASGSYKGLWVYLVGPVTGALLGAWSYTTIKETNEPAPATSLISFPFELRTRNGEIENVKSKDNPQIMSENNV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1686 278 Gene3D Glycerol uptake facilitator protein. 172 246 IPR023271 -
Acco06g1686 278 Gene3D Glycerol uptake facilitator protein. 32 171 IPR023271 -
Acco06g1686 278 MobiDBLite consensus disorder prediction 1 22 - -
Acco06g1686 278 Pfam Major intrinsic protein 44 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1686 278 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1686 278 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1686 278 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1686 278 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1686 278 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1686 278 PANTHER AQUAPORIN NIP2-1 26 246 IPR034294 -
Acco06g1686 278 SUPERFAMILY Aquaporin-like 40 243 IPR023271 -
Acco06g1686 278 ProSitePatterns MIP family signature. 103 111 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1686 Acco-ChrAcco06 12064503 12066622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1686 44 240 Major Intrinsic Protein MIP AT1G80760 41.667 1.63e-59 189