Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1681 ATGGACTTAACCCCTTCCATCGCTAACACCACCACCACAACCGCAACCAATACTCCTACTACTACAAAATCCCCAGAACATGACAGCGAAACTCCGACCCGGATCCAGACCGGCGCTAACGGTGTCCTCAAGCGCCACCACCATCCCCGCCGCCTCCCCATCCACCAACTCCCTGTTACGTACAGGGAATGCTTGAAAAACCATGCAGCCAGCTTAGGAGGCCACGCCCTTGACGGTTGTGGCGAGTTCATGGCCTCTCCCACCGCCAACCTCGCCGACCCCAGCTCCATCAAATGCGCCGCCTGCGGCTGCCACCGCAATTTCCACCGCCGCGAGCCCGAAGAGCCTATCTCCACAACCCACGTCATCGAGTACCAGTCTCACCATCGACACCATCCCCCGCCGCCTCTTCCTTTCCAGGTTTCCAATCGAAGCCCCAATTCAGCGTCGCCACCTCCGATCTCCTCTTCGTACTACCCGTCCGCACCCCATATGCTTCTGGCTCTCTCTGCCGCCGGGATACAAGCTCCTCCGGAGAGCGCAGCTGCTCCCGCTAACTTTCTGACAACGCCGAGCCCGAATGCGCGGAAGCGGTTCAGGACCAAGTTCACCCAGGATCAGAAGGAAAAGATGTACCATTTCGCTGAGAAGGTGGGGTGGAAGATGCAGAAGAGGGACGAAGACTTGGTTCAAGAATTCTGCAATGAGGTTGGGGTTGACAGGGGAGTGTTGAAGGTTTGGATGCACAACAACAAGAACACTTTGGGCAAGAGAGATGCTGATAATAATGATAATGATGGCAGGAACGCTCTAGAGCAAGATCCTCGCGCCCTCACCACCGGAATCCATGCCAACAACGACAACGGCAGCGCGCAGGATCCGAATCACCACAACCACCTCTTCACTACCAACGATAATAGTGGGGCAAACCTTGGTACTAATGGGTCTTTCTCGTCCTCTTGA 963 0.5607 MDLTPSIANTTTTTATNTPTTTKSPEHDSETPTRIQTGANGVLKRHHHPRRLPIHQLPVTYRECLKNHAASLGGHALDGCGEFMASPTANLADPSSIKCAACGCHRNFHRREPEEPISTTHVIEYQSHHRHHPPPPLPFQVSNRSPNSASPPPISSSYYPSAPHMLLALSAAGIQAPPESAAAPANFLTTPSPNARKRFRTKFTQDQKEKMYHFAEKVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNTLGKRDADNNDNDGRNALEQDPRALTTGIHANNDNGSAQDPNHHNHLFTTNDNSGANLGTNGSFSSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1681 320 MobiDBLite consensus disorder prediction 124 154 - -
Acco06g1681 320 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 61 112 IPR006456 -
Acco06g1681 320 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 255 - -
Acco06g1681 320 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 60 112 IPR006456 -
Acco06g1681 320 NCBIfam homeobox domain, ZF-HD class 196 253 IPR006455 -
Acco06g1681 320 MobiDBLite consensus disorder prediction 280 320 - -
Acco06g1681 320 MobiDBLite consensus disorder prediction 1 34 - -
Acco06g1681 320 FunFam Zinc-finger homeodomain protein 2 186 257 - -
Acco06g1681 320 SUPERFAMILY Homeodomain-like 191 257 IPR009057 -
Acco06g1681 320 Pfam ZF-HD protein dimerisation region 59 113 IPR006456 -
Acco06g1681 320 Gene3D - 189 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1681 Acco-ChrAcco06 12030256 12031218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1681 21 291 ZF-HD Transcription Factor Family AT3G28920 49.662 1.56e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Acco06g1681 ZF-HD_dimer 3.3e-28 No_clan