Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1680 ATGTTCACGTTTTTAGGTCAAGAGGCTATGGACAATTCTTATTGGGTTAGGGTTCGATGTACATATTCATTAGAAAGCAGAGCTAGAACAGAGGGATTTGACGCTGGCGAGATCATGAGAAAACGTCAAGTTGTGGTGAGAAGAGAGGAGCCAGTTGAGTGCTCAAACTCTTCGTCTTTTACTGTTAGGAGTGTGAGATATGGAGAGTGCCAAAAGAATCACGCGGCCAACGTCGGAGGCTACGCTGTGGATGGTTGCCGGGAGTTCATGGCAAGCGGCGACGAAGGCACAGCTGCCGCTCTGACCTGTGCCGCGTGTGGTTGCCACAGGAACTTTCACAAGAGAGAGGTCGAGACTGAAGTAGTGTGTGAGTGCTCTTCCCCTACCTCCAACGGCACTTGA 402 0.505 MFTFLGQEAMDNSYWVRVRCTYSLESRARTEGFDAGEIMRKRQVVVRREEPVECSNSSSFTVRSVRYGECQKNHAANVGGYAVDGCREFMASGDEGTAAALTCAACGCHRNFHKREVETEVVCECSSPTSNGT 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1680 133 Pfam ZF-HD protein dimerisation region 65 117 IPR006456 -
Acco06g1680 133 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 67 116 IPR006456 -
Acco06g1680 133 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 66 117 IPR006456 -
Acco06g1680 133 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 40 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1680 Acco-ChrAcco06 12016995 12018102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1680 39 132 Zinc finger-homeobox gene family AT3G28917 74.747 9.73e-44 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Acco06g1680 ZF-HD_dimer 3.4e-30 No_clan