Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1673 ATGGAGGAGAAGAACGAAATAGATGTATTTGATTATATTCTGCTGCCTGGTTTTCGGTTTCATCCCACAGACGAGGAGCTTGTTGACTTTTACCTCAAGAAAAAAATACAGCAAAAGACTTTGCCTAATGACATCATTAAGCAAGTGAATATTTACAAGTACGACCCATGGGATCTTCCAAAGATGGCAAGCAGTAGTAGAGAAGAAGAGTTATACTTTTATTGTCAAAGAGAGAGAAAATACAGAAACAGTGGTCGCCCAAATAGAGTGACCAGAGCTGGGTTCTGGAAGGCCACTGGAACTGATCGACCTATATACTCTTCAAAGGGAAATTGCATCGGTTTAAAGAAGTCTCTTGTGTTCTACAAAGGCAGAGCCGTCCAAGGCATCAAAACTGAATGGATGATGCATGAGTTTCGTCTTCCCTCTCATTCTGATTCTTCTCTTCCCAGAAACCTCTCTCACAAAACCCTCCCTCCCACTGAGTCATGGGCAATTTGTAGGATATTCAAGAAAACCACCTCACGGAAACCATCTCATTCTCACCCCTGCATCCCTCAGTTCCCAGAGAGCTTGCCGGTGGGTGATATACTCACTCAGGGTGGTGGTGCCACTGCCACCGGCAACCACTTCAGTACAGAAAATATCTCAGGCGCGAATTTTGCAGCTCCAGATGCTCCCTGTTACAAACCCATCTCCACACTGGAAGCGTCAGGATTCATGATTTTGAACTCAGACTGGGAAGGATTTGAAGGGGCAAGCCAGCAGTTTAGTCAGGGCATGCAGGGGAACATAAACAGAGCAACAGAGTTTTCTTTCACTACACCTGCTTCTGGGGATGTTTGGAAATCTCCTCTGCTATGGGACACCCCCTTGTTCAACTGA 885 0.4542 MEEKNEIDVFDYILLPGFRFHPTDEELVDFYLKKKIQQKTLPNDIIKQVNIYKYDPWDLPKMASSSREEELYFYCQRERKYRNSGRPNRVTRAGFWKATGTDRPIYSSKGNCIGLKKSLVFYKGRAVQGIKTEWMMHEFRLPSHSDSSLPRNLSHKTLPPTESWAICRIFKKTTSRKPSHSHPCIPQFPESLPVGDILTQGGGATATGNHFSTENISGANFAAPDAPCYKPISTLEASGFMILNSDWEGFEGASQQFSQGMQGNINRATEFSFTTPASGDVWKSPLLWDTPLFN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1673 294 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 205 - -
Acco06g1673 294 FunFam NAC domain-containing protein 35 23 175 - -
Acco06g1673 294 Gene3D NAC domain 23 176 IPR036093 GO:0003677|GO:0006355
Acco06g1673 294 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Acco06g1673 294 SUPERFAMILY NAC domain 12 172 IPR036093 GO:0003677|GO:0006355
Acco06g1673 294 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1673 Acco-ChrAcco06 11964408 11965518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1673 2 239 NAC Transcription Factor Family AT5G39820 52.778 1.32e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g1673 NAM 3e-35 No_clan