Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1669 ATGACGCTTTCAACCAGATTCCTTTTTTCACCCCGACCTCGAGACCGATCAGAAGCTACCCTTTACTACTCACTTTGGAAGCTTGTATTTGTGAGGTTGGTGATGGCTGAAGCTACAGAGTCTAAAGCATTGCCGGAGGCTGAGAAGAAGAAGGATCAGAGTTTGCCATTTTACCAGCTCTTCTCTTTTGCAGACAAGTATGACTGGCTCCTTATGATCTCTGGGAGCTTAGGAGCAGTTGTTCATGGCTCATCCATGCCTGTTTTCTTCCTTCTTTTTGGTGAGATGGTCAATGGGTTTGGCAAAAACCAGATGGATTTGAAGAAAATGACTGAAGAAGTATCAAAGTATGCTCTGTATTTTGTGTACCTGGGCCTCGTTGTTTGCATATCATCCTACGCAGAAATTGCGTGCTGGATGTATACCGGGGAGAGACAAGTGGGCACGCTGAGAAAGAAGTACTTGGAGGCGGTGCTTAAACAGGACGTTGGGTTCTTTGACACCGATGCAAGAACAGGGGATATCGTTTTTAGTGTATCCACTGACACTCTGCTCGTCCAAGATGCCATTAGCGAGAAGGTGGGAAACTTCATACATTATTTGTCAACGTTCCTGGCGGGTCTGGTGGTTGGTTTTGTGTCAGCATGGAAGCTAGCTCTTCTAAGTGTTGCGGTGATTCCGGGCATTGCTTTTGCTGGTGGGTTGTATGCTTACACACTCACAGGCCTGACCTCCAAGAGTCGCGAATCCTATGCGAATGCTGGAATAATCGCCGAGCAGGCGATTGCTCAAGTTCGAACTGTGTACTCGTATGTTGGTGAGAGTAAGGTCTTGAATTCTTATTCTGATTTGATACAAAACACACTGAAGCTCGGATACAAGGCGGGAATGGCTAAAGGTTTAGGCTTGGGATGTACGTATGGGATAGCTTGCATGTCATGGGCATTAGTGTTTTGGTATGCTGGAGTTTTCATCAGGAATGGCCAAACTGATGGAGGAAAGGCATTCACCGCTATTTTCTCTGCCATTGTTGGTGGCATGAGTTTGGGGCAGTCCTTTTCAAATTTAGGGGCATTTAGTAAAGGCAAAGCAGCAGGATACAAATTGATGGAAATCATTAAGCAGAAACCCACCATAGTGGAAGACCTATCTGAGGGGAAGTGCTTGTCAGAGATTAATGGAAATATTGAGCTTAAGGATGTAAGTTTCAGCTATCCATCAAGGCCAGATGTACTCATCTTCCGCAATTTCTCGATCTTTTTTCCTGCTGGCAAAACTGTTGCGGTTGTTGGCGGTAGTGGTTCGGGGAAAAGCACCGTTGTTTCCTTGATAGAAAGGTTCTACGATCCTAATGAAGGGCAAGTTTTATTGGATAACGTAGACATCAAGACACTACAATTAAAATGGTTACGTGACCAAATTGGGCTGGTGAATCAAGAACCTGCATTATTTGCAACCACCATACTTGAGAATATACTCTATGGCAGACCTGATGCAACCATGGCTGAAGTAGAAGCGGCTGCTTCTGCTGCAAATGCTCATAGCTTTATTACCTTGCTTCCTAATGGATATAACACTCAGGTGGGAGAGCGAGGAGTCCAGTTATCTGGAGGTCAAAAACAGAGAATTGCCATTGCTAGAGCTATGCTGAAAAACCCCAAGATCCTTCTTTTAGATGAAGCAACCAGTGCTCTTGATGCTGGTTCAGAAAGCATTGTTCAAGAAGCACTAGATCGCCTTATGGTTGGTCGTACAACTGTAGTTGTAGCCCATCGTTTATCTACCATAAGGAATGTTGACAGCATCGCAGTTATACAGCAAGGGCAAGTTGTGGAGACAGGAACTCATGAGGATCTTATTGCCAAGGCAGGGACCTATGCTTCACTAATAAGGTTCCAAGAAATGGTTGGAAATAGGGACTTCTCCAACCCGTCAACTCGCCGGACACGTTCATCGCGACTGAGCCATTCACTTTCGACCAAGTCTTTAAGCCTCAGGTCTGGAAGCCTGAGGAACCTCAGTTACCAGTACAGCACTGGAGCTGATGGTCGCATTGAGATGATATCAAATGCTGAAACAGACAAGAAGAATCCTGCTCCTGATGGATACTTCTTCCGTTTACTCAAGTTAAATGCCCCTGAATGGCCTTACTCAATAATGGGAGCTGTAGGATCTATTCTTTCTGGCTTTATTGGCCCAACTTTTGCTATTGTTATGAGCAATATGATTGAGGTGTTTTACTTTAGAAATTATGCATCCATGGAGAGGAAGACTAAGGAGTACGTCTTCATCTACATTGGAGCAGGTCTTTATGCCGTTGGTGCATATTTGATACAGCATTACTTCTTCAGTATTATGGGTGAAAATCTCACCACAAGGGTTCGAAGAATGATGCTTGCCGCAATTTTAAGGAATGAAGTAGGATGGTTCGATGAAGAAGAGCACAACTCAAGCCTAGTTGCAGCTCGCCTTGCCACTGACGCTGCTGATGTGAAATCTGCTATTGCTGAGAGGATCTCAGTGATTTTGCAGAACATGACATCTCTTCTCACTTCTTTCATTGTTGCTTTCATTGTGGAATGGAGAGTTTCCTTGCTCATCCTGGGAACCTTCCCTCTTCTTGTTCTAGCTAACTTTGCTCAGCAACTCTCTCTAAAAGGGTTTGCTGGAGACACAGCCAAGGCTCATGCAAAGACTAGTATGATTGCCGGAGAGGGAGTCAGTAACATAAGGACGGTCGCTGCGTTCAATGCCCAAAACAAGATCATATCTTTATTCTGCCACGAGCTTCGTGTCCCACAAGGCCGGAGTTTACGCCGGAGCCAAACTGCCGGCAGCCTATTTGGCATCTCCCAGCTTGCCCTTTATGCCTCCGAAGCACTCATCCTGTGGTACGGCGCGCATCTTGTGAGCAAAGGCCAGTCGACCTTCTCAAAGGTCATAAAAGTTTTCGTCGTCCTAGTCATCACGGCCAATTCCGTCGCAGAAACCGTCAGCCTCGCCCCTGAAATAATCAGAGGCGGTGAAGCTGTCGGTTCTGTCTTCTCCATTCTCGATCGTCAAACAAAGATCGACCCTGACGATCTCGATGCTGAGCCAGTTGAGTCCATTCGTGGGGAGATTGAACTAAGACATGTCGATTTTGCCTACCCATCACGACCAGACGTGATGGTGTTTAAAGATCTTAATCTCAGAATCCGTGCAGGGCAGAGCCAGGCTCTAGTGGGGGCCAGTGGGTCAGGAAAAAGTTCTGTCATTGCATTGATCGAGCGTTTCTATGATCCCGTGGGCGGAAAAGTCATGATTGACGGAAAAGACATTAAAAGATTGAACTTGAAGTCCTTAAGGCTAAAGATTGGTTTAGTGCAACAGGAGCCTGCTCTGTTTGCAGCAAGCATTTTCGACAACATAGCTTATGGCAAAGACGGAGCAACGGAAGCAGAAGTAATCGAAGCTGCTCGTGCAGCGAATGTTCATTCTTTTGTTAGTAGTTTGCCTGAAGGATACAATACACCAGTTGGTGAAAGAGGAGTTCAATTATCTGGTGGGCAAAAACAGAGGATAGCTATTGCCAGAGCAGTTCTTAAGGATCCCACAATACTTCTCCTAGACGAGGCCACAAGTGCGCTTGATGCTGAATCAGAGTGTGTCCTACAAGAAGCACTAGAGAGGCTAATGAGGGGTCGAACCACCGTGCTTGTGGCTCATCGCTTATCAACCATTAGAGGGGTGGACAGTATCGGCGTGGTGCAAGATGGGCGAATTGTGGAGCAGGGGAGCCATGCAGAACTTGTGAGCAGACCAGAGGGTGCATATTCTAGACTCTTGCAGCTACAAAATCATCACATGTGA 3852 0.4605 MTLSTRFLFSPRPRDRSEATLYYSLWKLVFVRLVMAEATESKALPEAEKKKDQSLPFYQLFSFADKYDWLLMISGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTEEVSKYALYFVYLGLVVCISSYAEIACWMYTGERQVGTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWKLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKVLNSYSDLIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDLSEGKCLSEINGNIELKDVSFSYPSRPDVLIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGRPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEDLIAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFFRLLKLNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYFRNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKIISLFCHELRVPQGRSLRRSQTAGSLFGISQLALYASEALILWYGAHLVSKGQSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRQTKIDPDDLDAEPVESIRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPVGGKVMIDGKDIKRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKDGATEAEVIEAARAANVHSFVSSLPEGYNTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGVVQDGRIVEQGSHAELVSRPEGAYSRLLQLQNHHM 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1669 1283 FunFam ABC transporter B family member 19 386 634 - -
Acco06g1669 1283 CDD ABC_MTABC3_MDL1_MDL2 396 633 - -
Acco06g1669 1283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1033 1279 IPR027417 -
Acco06g1669 1283 Gene3D - 394 657 IPR027417 -
Acco06g1669 1283 CDD ABC_6TM_Pgp_ABCB1_D1_like 72 369 - -
Acco06g1669 1283 FunFam ABC transporter B family member 1 59 394 - -
Acco06g1669 1283 ProSitePatterns ABC transporters family signature. 1180 1194 IPR017871 GO:0005524|GO:0016887
Acco06g1669 1283 Pfam ABC transporter transmembrane region 719 990 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1669 1283 Pfam ABC transporter transmembrane region 77 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1669 1283 FunFam ABC transporter B family member 1 698 1007 - -
Acco06g1669 1283 Gene3D - 1031 1283 IPR027417 -
Acco06g1669 1283 SUPERFAMILY ABC transporter transmembrane region 700 1025 IPR036640 GO:0005524|GO:0016020
Acco06g1669 1283 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 75 361 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1669 1283 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Acco06g1669 1283 CDD ABC_6TM_Pgp_ABCB1_D2_like 708 1024 - -
Acco06g1669 1283 CDD ABC_MTABC3_MDL1_MDL2 1041 1279 - -
Acco06g1669 1283 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 719 1006 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1669 1283 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1043 1277 IPR003439 GO:0005524
Acco06g1669 1283 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Acco06g1669 1283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 633 IPR027417 -
Acco06g1669 1283 FunFam ABC transporter B family member 19 1031 1280 - -
Acco06g1669 1283 SMART AAA_5 423 615 IPR003593 GO:0016887
Acco06g1669 1283 SMART AAA_5 1068 1254 IPR003593 GO:0016887
Acco06g1669 1283 Pfam ABC transporter 1060 1208 IPR003439 GO:0005524
Acco06g1669 1283 PANTHER ABC TRANSPORTER B FAMILY 37 731 IPR039421 -
Acco06g1669 1283 Gene3D ABC transporter type 1, transmembrane domain 119 1015 IPR036640 GO:0005524|GO:0016020
Acco06g1669 1283 SUPERFAMILY ABC transporter transmembrane region 60 381 IPR036640 GO:0005524|GO:0016020
Acco06g1669 1283 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1669 Acco-ChrAcco06 11927648 11934364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1669 46 1279 Calmodulin-binding Proteins AT2G36910 53.711 0.0 1351