LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g1657	ATGTCAGTGGAGACCATGGCAAAAATGTCTGGTAGTGCTCGGGGTCTAGAGACTGGAAAGAAGAGAATAATTTCCATTTGCCTTGAAGAAGATTGCTGTGTTCAAGAGAATGATGAACTCAAGTCTGGTAAAGAAGAGATGGGTGGTGAGAAAGAAGAAAATGAAGAAAGGTTGAAGATGAAGGATTACCAGTCCCTCCAATTGCGTTTCTTTGATATCTTGCGAAGAGAAGCTTCTGAAAAAGTTATAGCAGATTCAGCTAATTCCCACGATGAAACTGAAGAGCCTGAGCTCCTGTCACTTTGCCTGGGAAGAAGTCCAAGGGACCCCAAAAAAGAAACAAGAATCGGAAACACTGCTAAACATAAAGAAAGTGAAGATTTGGAGGCTTGCCTTACCCTTGGATTAGACTCCAATTGTAAGTTATCAATGGAGATGGTGTCTGATCAGAGCCCAGGAAACAGCCCAGGGGAAACTAAGGAAGCAGAAATAGAGGGAACATGGCAATCAAATAAATCTGTCGAGGCCAAAAATGGAGAAGATCATGAAATTTCAGAGCAGATACCTGCTAAGAAAGCGAGAGTTTCTGTGAGAGCAAGATGTGACACCCCCACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGGTTTCTCCAGCATGTCCCGTCAGAAAACAGGTGCAAAGATGTGCTGAGGACATGTCTATCTTAATCACTACATATGAAGGGGCCCACAACCACCCACTTTCAGTGTCAGCCACAGCCATGGCTTCCACTACTTCAGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCAACATCTCAGCCTGCAGATAACAGTTTTGCACCATTAACAAATGCTCCTACACTGCTTAATGGCCAAAACCTTGGACATTTTGATCTATCAAGATCAAAACAGGTCTTTTTGCCCAATCCTGCCTCACCTTTGTTCCCAACAATCACTCTAGACTTAACTTCTAGTTCATCCTCATCAACCCATGTCAATAATTTTCTCCCTTCAAGCTTTGCTTTAAACCCAAGATTTCCTCCAACAAGTCTAAGTTTTTGCTCAAAGGAGCCCAACATTCAACAAGCAGTGTGGGGTAATGGAATCCTTAATAATGAGAAAATCCATATGAGGTCAGTTGACCCGGGAAATCAATCTCAACAACAGTTCCATCAAAACTTCCTGCAAAACCAAGCTCGTCCTTCACAAGAAGCTTTAGCAGAAACCTTAACCAGAGCAATCAGTACGGATCCTAAGCTTCGATCAGTAATAGCTGCAGCAGTTTCATCTATAGTGGGTCAAGGATCCACCAATGTGAACCAAGCACGGGGAGGGGAAATTTTAGAGTTAGGGTTGAACTTGAAACTAGGAGAGCATTCTCAATTTGCTTCTCCTGATCTGCTGACCCAAAATGGGAAAGGATGCTTGCCAGGTTATTTCAACAGATTGTCATCAAATTCCTATACCGGAAACTTCATGCCTCTACAACCTCCAGTTCCATTCTCTGTCTCTAAGAGAAAAGTGCCTCCTACCATTAGTGATCAGATCAATCATTAA	1614	0.4318	MSVETMAKMSGSARGLETGKKRIISICLEEDCCVQENDELKSGKEEMGGEKEENEERLKMKDYQSLQLRFFDILRREASEKVIADSANSHDETEEPELLSLCLGRSPRDPKKETRIGNTAKHKESEDLEACLTLGLDSNCKLSMEMVSDQSPGNSPGETKEAEIEGTWQSNKSVEAKNGEDHEISEQIPAKKARVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVSPACPVRKQVQRCAEDMSILITTYEGAHNHPLSVSATAMASTTSAAASMLLSGSSTSQPADNSFAPLTNAPTLLNGQNLGHFDLSRSKQVFLPNPASPLFPTITLDLTSSSSSSTHVNNFLPSSFALNPRFPPTSLSFCSKEPNIQQAVWGNGILNNEKIHMRSVDPGNQSQQQFHQNFLQNQARPSQEALAETLTRAISTDPKLRSVIAAAVSSIVGQGSTNVNQARGGEILELGLNLKLGEHSQFASPDLLTQNGKGCLPGYFNRLSSNSYTGNFMPLQPPVPFSVSKRKVPPTISDQINH	537

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g1657	537	Pfam	WRKY DNA -binding domain	208	265	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Acco06g1657	537	FunFam	probable WRKY transcription factor 31	191	268	-	-
	Acco06g1657	537	MobiDBLite	consensus disorder prediction	39	58	-	-
	Acco06g1657	537	MobiDBLite	consensus disorder prediction	147	186	-	-
	Acco06g1657	537	Gene3D	WRKY domain	190	267	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Acco06g1657	537	SUPERFAMILY	WRKY DNA-binding domain	199	266	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Acco06g1657	537	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	37	459	IPR044810	GO:0003700
	Acco06g1657	537	SMART	WRKY_cls	206	266	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Acco06g1657	537	ProSiteProfiles	WRKY domain profile.	201	267	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g1657	Acco-ChrAcco06	11835455	11837702	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g1657	47	502	WRKY Transcription Factor Family	AT5G15130	43.574	4.09e-79	255

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Acco06g1657		WRKY	5.3e-24	CL0274