Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1651 ATGCAAAATGAAGAGAGCATAGGAAAAAGTAGGATGTGCATGAAAGGATGTGACTTCCAAGGAACTCGCAGTGTCAAGAGACGAAGAAGAGAACATGAAGCAGCATTACTTAACTGTGATGATAATCTAAGTCAGAAGAGACAGCAAGTTGATCAAAATTCTATTACACATACTGTGAAGAGAAGTTCAAGATTTCGAGGCGTCAGCAGACACAAATGGACTGGTCGGTATGAGGCTCACCTGTGGGACAAGCTCTCTTGGAATGTAACACAGAAGAAGAAAGGGAAGCAAGGGGCTTATGATGAAGAAGAGTCCGCAGCCAGAGCACATGATTTAGCTGCACTGAAATACTGGGGAACATCAACTTCCACCAATTTTCCGATATCAGATTACATGAAAGAGATAGAAATAATGCACGCTATGACAAAAGAGGAGCATTTGGCCACTTTAAGAAGAAAAAGTAGTGGCTTTTCAAGAGGCGTGTCAAAGTACAGGGGCGTTGCAAGGCACCACCTAAATGGGAGATGGGAAGCAAGGATAGGGAGGGTTTTTGGAAACAAATATCTGTACCTTGGCACTTACAGCACCCAGGAGGAAGCTGCTCGTGCTTACGACATTGCGGCCATTGAGTTCAGAGGGATTCATGCTATAACCAACTTTGATTTGAGCAATTACATAACACAGTTAAGACCTGCCAGAGGAAATATCCAAGAACCAAAACTTGAATCACTGATTGTACCAGAGGTTCACACAATGACCCCTCCTTTTAATTATACTTCAACAGAGGAGTCCAAAACCTTGGCCCTTGACAGCAATTTTTTCAGCACAGATTACCTGAGGTCTTCACAGAGGCAAGAGGTTCTTGAGAAGGAAACTGCTTTATTCTCAAGCAGTAAGTCATCTTCACCTACTGCTCTTGGCCTTCTTCTCCGTTCTTCAATTTTCAGGGAATTAGTGGAAAAGAATTTGAATATGTTTGGAGATGAAATTGATGTGGAAGATGCAAAGGATCAACAACCACAACTATCAGGTGATGATGAGTTGAGTGGAATATTCTACGATAGTATTGGTGATACACCATTTGCCAATGATCCTGAAAGATACAATTTTGCAAGAGATCTCCACGGTTTTATGAATGGATAA 1143 0.4182 MQNEESIGKSRMCMKGCDFQGTRSVKRRRREHEAALLNCDDNLSQKRQQVDQNSITHTVKRSSRFRGVSRHKWTGRYEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAHDLAALKYWGTSTSTNFPISDYMKEIEIMHAMTKEEHLATLRRKSSGFSRGVSKYRGVARHHLNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEFRGIHAITNFDLSNYITQLRPARGNIQEPKLESLIVPEVHTMTPPFNYTSTEESKTLALDSNFFSTDYLRSSQRQEVLEKETALFSSSKSSSPTALGLLLRSSIFRELVEKNLNMFGDEIDVEDAKDQQPQLSGDDELSGIFYDSIGDTPFANDPERYNFARDLHGFMNG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1651 380 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 PRINTS Ethylene responsive element binding protein signature 203 223 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 ProSiteProfiles AP2/ERF domain profile. 163 221 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 CDD AP2 162 223 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 Gene3D AP2/ERF domain 162 223 IPR036955 GO:0003700|GO:0006355
Acco06g1651 380 Gene3D AP2/ERF domain 63 129 IPR036955 GO:0003700|GO:0006355
Acco06g1651 380 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 45 250 - -
Acco06g1651 380 CDD AP2 63 129 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 SMART rav1_2 64 133 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 SMART rav1_2 163 227 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 FunFam AP2-like ethylene-responsive transcription factor 162 223 - -
Acco06g1651 380 SUPERFAMILY DNA-binding domain 63 129 IPR016177 GO:0003677
Acco06g1651 380 Pfam AP2 domain 162 213 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 Pfam AP2 domain 63 119 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 ProSiteProfiles AP2/ERF domain profile. 64 127 IPR001471 GO:0003700|GO:0006355
Acco06g1651 380 SUPERFAMILY DNA-binding domain 162 223 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1651 Acco-ChrAcco06 11785341 11787270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1651 141 229 AP2-EREBP Transcription Factor Family AT5G57390 36.082 4.45e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco06g1651 AP2 1.1e-09 CL0081