LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g1637	ATGATGACAATTAAAGGAGCGTCAAACAAGGCTTGCGCTGCATGCAAATATCAGAGAAGAAGATGTTCAAATGACTGCGCTCTTGCTCCTTATTTTCCCTCCGATCAGCCAAAAAAATTCAGTAACGCTCACCGTTTGTTTGGAGTAGCCAACATCAAGAAGATTCTGGATCAGGTAGAGCCCAGGCTAAGGGACGAAGCTATGACATCAATTATCTTTGAATCTAATATGCGAGAACAGTTTCCTGTTATGGGATGTTTAGGACTCATATGTGAATATAATAAGAAGGTACTTGCTGCCTGGGAAGAACTGAGTTATGTGAATCTAAAACTTTCCGTTTACAGGGAACAATATCATTCTCAAATTTCCCAAAAAATTTCTCCTGCCATGTCGATGGAATTTATACCTGTTAGTACAGATCCCTTCCCCATGTCAGACCACATACAATATGATAACAGTGAAGTTGTTAGATCAACAAAATATGATAACAATGGAGTTATACAATATGAAAACAATGGAGTTGATGACAATGGAGTTATTAGATTTGATGGATGCGGTGGTGGAAATGATGACAATGGAGTTATTAGATTTGATGGATGCGGTGGTGGAAATGAAGGATTTGTTTTTCAGTCATCGATCAACTCTATGACTGCACAATCGTCTCATTTCACAATCAACCATCATCAACCAGAAACGAACACAGTTGAATGTCACGATTTTAATCACATTCCATTACTTTTGGAATACAAAGAACAACCATGTGAATCGAAACCGAGCATTGATTTATCATTTAAAGAAGCAAGCTTTCACATTAAGCGCCGAAGGTTAAACTCAAATGCAGCAGCGGTACGTATGAAAGGAAAGGATGATGATTAG	876	0.3824	MMTIKGASNKACAACKYQRRRCSNDCALAPYFPSDQPKKFSNAHRLFGVANIKKILDQVEPRLRDEAMTSIIFESNMREQFPVMGCLGLICEYNKKVLAAWEELSYVNLKLSVYREQYHSQISQKISPAMSMEFIPVSTDPFPMSDHIQYDNSEVVRSTKYDNNGVIQYENNGVDDNGVIRFDGCGGGNDDNGVIRFDGCGGGNEGFVFQSSINSMTAQSSHFTINHHQPETNTVECHDFNHIPLLLEYKEQPCESKPSIDLSFKEASFHIKRRRLNSNAAAVRMKGKDDD	291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g1637	291	ProSiteProfiles	LOB domain profile.	10	111	IPR004883	-
	Acco06g1637	291	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	9	143	-	-
	Acco06g1637	291	Pfam	Lateral organ boundaries (LOB) domain	11	106	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g1637	Acco-ChrAcco06	11661760	11662940	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g1637	2	115	AS2 family	AT3G47870	55.263	3.41e-39	138

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Acco06g1637		LOB	3.4e-34	No_clan