Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1627 ATGGCAAGATATTCGCAGAATCCCCGGAATTGCTTGTTGTTACTGCTCTGTAGTTTGGCGGTGCTATGGTGTTTTGCTGCCTCGCAGGCTGAAGATGACTTGCATTGCCTTAAAGGCATTAAAAGCTCTTTCAGTGATCCTCAGGGAAAGCTTGCTTCATGGCGGTTTGATAACCGCACCGCCGGTTTCATATGCACGTTCGTCGGCGTTACGTGTTGGAACCCCCAGGAGAATCGGGTCCTCAATCTGGAGCTCCGGGATATGAAACTCTCGGGCCAGGTGCCGGAATCGTTGAAGTATTGCGGTAGGAGTCTGCAGAAACTGGATCTTGGGTCCAACGACGTTTCCGGTACGATCCCTACTCAGATATGCGATTGGTTGCCATTTCTAGTGACACTGGACTTGTCCGATAATCATCTCGCTGGGCAAATTCCTCCTACTCTTGGGAATTGCACTTACTTGAATACCCTAATTCTTTCTAATAATCAACTTTCGGGTGCTATTCCTTTCGAGTTTGGGAGTCTGGCTAGGCTCAGGGCATTTTCTGTTGCTAATAATCATCTTACTGGTACGATTCCTTCGTATTTAAGTGGTTATGATAAGGAAGATTTTGCTGGGAATAGTGGACTTTGTGGAGGTCCCCTTGGGTCAAAGTGTGGTGGATTGAGTAAGAGGAATCTTGCTATTATCATCGCTGCTGGGATCTTTGGTGCTGCTGCTTCTATATTATTGGCTTTTGGATTGTGGTGGTGGTATCATTTGCGGTTGGCTAGGAAGAAGAGGGGATTTGGGGTTGGAACGAGTGATGATTGGGCTGCGAGGTTGAGGGCTCACAGACTTGTTCAAGTTACATTGTTTCAGAAACCCCTTGTGAAGGTTAAACTAGGAGATTTGATGGCGGCTACCAATAATTTCAATTCTAAAAATATTATCATGTCTTCAAGAACAGGGACTACCTATAAAGCAGACCTTCCTGATGGATCAACACTTGCAGTCAAGCGGCTTAACATCTGTAAGATTGGAGAAAAGCAGTTTCGCACGGAGATGAGTAGGCTAGGACAAGTCAGGCATCCGAACTTGGCACCCCTTTTAGGCTTCTGTGTGGTTGAAGAGGAAAAACTTCTGGTTTATAAGCACATGTCAAATGGTACTCTGTCTTCGTTGTTGCATAAAGATGGTATTGGATCGGAATTGGATTGGCCAATGAGATTCAGGATAGGCTTAGGCGCCGCTAGGGGTCTTGCTTATCTGCATCATGGGTGTCATCCTCCAATAAGACACCAAAACATCTGTTCCAATGTGATGGTTATTGATGAAGATTTCGATGCTCGATTAATGGACTTTGGACTTGCTAGGCTTATGACTTCTGATTCCAATGATAGTAGCTTTGTGAGCGGGGACTTGGGCGAGCTTGGCTATGTAGTTCCTGAATATCCAAGCACCCTTGTTGCTTCTCTAAAAGGGGATGTGTATGGATTTGGAGTTGTGCTTTTGGAGTTGGTTACTGGTCGCAAACCTCTTGAAGTTGACAATGGAGAGGAAGAGTTCAAGGGTAACTTAGTTGATTGGGTCAATATGTTTTCTAGTTCTGATCGAGCTAAGGATTGCATTGATAGGGCCATGTGTGGAAGAGGGCATGAGGAGGAGATTCTGCAGGTTCTGAAAATTGCATGTAATTGTGTGGTTTCTCGCCCAAAGGACAGGTGGTCCATGTACCAGGTTTATCATTCCTTGAAGAGTTTATCCAAAGACTACAACTTCTCTGAACATGATGATGAATTTCCATTGATTTTTAACAAGCCGGAGTCAGCATAA 1815 0.4496 MARYSQNPRNCLLLLLCSLAVLWCFAASQAEDDLHCLKGIKSSFSDPQGKLASWRFDNRTAGFICTFVGVTCWNPQENRVLNLELRDMKLSGQVPESLKYCGRSLQKLDLGSNDVSGTIPTQICDWLPFLVTLDLSDNHLAGQIPPTLGNCTYLNTLILSNNQLSGAIPFEFGSLARLRAFSVANNHLTGTIPSYLSGYDKEDFAGNSGLCGGPLGSKCGGLSKRNLAIIIAAGIFGAAASILLAFGLWWWYHLRLARKKRGFGVGTSDDWAARLRAHRLVQVTLFQKPLVKVKLGDLMAATNNFNSKNIIMSSRTGTTYKADLPDGSTLAVKRLNICKIGEKQFRTEMSRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLSSLLHKDGIGSELDWPMRFRIGLGAARGLAYLHHGCHPPIRHQNICSNVMVIDEDFDARLMDFGLARLMTSDSNDSSFVSGDLGELGYVVPEYPSTLVASLKGDVYGFGVVLLELVTGRKPLEVDNGEEEFKGNLVDWVNMFSSSDRAKDCIDRAMCGRGHEEEILQVLKIACNCVVSRPKDRWSMYQVYHSLKSLSKDYNFSEHDDEFPLIFNKPESA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1627 604 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1627 604 CDD STKc_IRAK 311 581 - -
Acco06g1627 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 600 - -
Acco06g1627 604 Pfam Protein kinase domain 316 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1627 604 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Acco06g1627 604 SUPERFAMILY Protein kinase-like (PK-like) 283 578 IPR011009 -
Acco06g1627 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 379 - -
Acco06g1627 604 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 580 - -
Acco06g1627 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 220 - -
Acco06g1627 604 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Acco06g1627 604 Gene3D Phosphorylase Kinase; domain 1 265 379 - -
Acco06g1627 604 Gene3D Transferase(Phosphotransferase) domain 1 380 600 - -
Acco06g1627 604 SUPERFAMILY L domain-like 30 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1627 Acco-ChrAcco06 11590942 11592756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1627 1 603 Receptor kinase-like Gene Family AT3G28450 63.785 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Acco06g1627 Pkinase 2e-25 CL0016