Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1623 ATGCCACGGCTTCGATATAATAAACCTCCTTGGAACCATGGGAGGCCATCATCATCGGTTGTGGTTGCTGAGTGGATTTTGCCCCCACCACGAGCCGCTGTCCGTGTTCTGAATCCTATAAATACACAACATAGGCAGCACTGGACAGGTAACTTACTCAAAGCCGCAAACTTGAAAAAACTGAGGATGATTTGGGGCTCGGATAGTAAGACCGAGGCCATGAAGAAGAAGAAGAGTAATGGATCTGTTGGATCCATTTTCATGCATGCCGATTCCCAAGATTGGTTTTTGATGGTTCTTGGTGTGTTGGGGTCTTTCGGCGACGGCTTCACGGGGCCTACTGTGTTGTTTATTAGTGGCCGCTTGATGAACAATATAGGAGGGGCCTCGTCTCAAATGGACGTGTCTGCTTTTGTTCAGAACTCTAATGAGAACGCGGTGGCTCTATTATATTTGGCCTGTGGGTCATTTTTAGCATGCTTCCTTGAGGGATACTGCTGGACGAGAACAGGAGAGAGACAAGCAGCGAGAATAAGATCCAGGTATTTGAGAGCAATGCTAAGACAAGAAGTTGCATACTTTGATTTGCAAGTTACAAGCACGTCCGAGGTCATCACCAGCGTGTCTAACGACAGCATCGTAATTCAAGATTTTCTCAGCGAAAAGGTTCCAAACTTGCTGACGAATCTCTCTATGTTCGTTGCGAGCTACGTTGTGGCCTTTTCAATGTTCTGGAGATTGGCTATTGTGGCCTTACCTTTCGTGGTTCTTCTAGTAATCCCTGGTTTAATGTACGGAAGGACATTAACTGGGTTGGCTAGCAAGATGAGGGACGAGTACAGCCAGGCCGGTGCAATCGCAGAGCAAGCAATATCTTCCATCAGAACCGTCCATTCCTTTGTCGGCGAAAGCAAAACCATATCTGCTTTCTCCTCTGCTTTACAGGGTTCAGTCAAGCTGGGGCTAAAACAGGGCCTAGCTAAAGGCTTAGCCATAGGAAGCAACAGTATTGTGTTCGTCATATGGTCCTTCATTTGCTATTATGGTAGTAGACTCGTCATGTACCACGGCGCTCAAGGTGGCACCGTCTTTGCCGTCGGAGCAGCCATGGCTCTCGGTGGATTATCGCTGGGAGCTGGTTTGTCCAACGTGAAGTACCTGTCGGAAGCGAGTTCAGCAGGGGAGAGAATAATGGAGGTGATAAAGAGAATTCCCAAGATTGACTCAGAGAACATGGAAGGTGAGATTCTGGAGAGAATTCATGGGGAAGTGGAGTTCGATCGAGTAGAGTTCGCATACCCATCGAGGCCAGACAGCATTATTCTGAGGGATTTTAGCATGAAGATTCCGGCGGGGAAGACGATGGCGCTGGTGGGTGAGAGTGGGTCAGGGAAGTCGACGGTGATATCACTGTTGCAGAGATTTTACGATCCAATGGGAGGAGAAATACGTTTGGACGGGGTGGGAATTAAGAGGGTGCAGCTAAAGTGGATGAGGTCGAAGGTGGGACTGGTGAGCCAAGAGCCGGCTCTGTTCGCCACAAGCATAAAAGAGAACATACTGTTTGGGAAAGAGGATGCTAGTGAGGATGAGATTGTGGAGGCTGCCAAGGCTTCCAATGCTCATGATTTTATCTCTCAGTTGCCACTGGGATACGATACCCAGGTGGGTGAACGAGGCGTTCAAATGTCAGGAGGACAAAAACAGAGGATTGCAATTGCGCGGGCCCTGATAAAAAAACCACGAATCCTCCTCCTTGATGAAGCAACAAGTGCTCTAGACAACGAATCCGAACGAGTTGTCCAAGAAGCTCTGGACAACGCAGCTGTTGGACGCACCACCACCATCGTCGCTCACCGCCTATCCACCATTAGGAACGCCGACGTTATCGCCGTCCTTCAAAACGGTAGTCTCATAGAAATGGGATCGCATGAGGAGCTCATCGAACACGAAAATGGGCTTTACACCTCTCTGGTTCGTCTCCATCAAACAGAGAAATCTAGAACGATTCAAGAGGATACCGTCGACGTCACTTCTACCTCTTCCATCACCGTATCAGATAGGGACATGAACAACACAAGCAGCCGAAGATTATCTCTCGTGCCTCGATCTAACTCTTCAAACTCAATAGGACAGGTTCGAGTTTCAAGTGCCGATGAAGAAACCAATGTGGCTACAGAAGAAAAGAAGCTCCCTGTTCCCTCGTTTCGGAGGTTGCTTGCCCTGAATCTCCCAGAATGGAAGCAAGCAACTTTAGGGTGTTTCAGTGCGTTTCTGTTCGGTGCAATTTACCCATTGTTCTCATTCTCAATGGGGTCAATGGTTTCTACCTTTTTTCTAACAGACCACGACGAGATTAAAAAGAAGATGAAGGTTTATGCGTTTTGCTACTTGGGTTTACTGGCCTCGTCATTGATTACTAGCATAAGCCAGCACTATAGTTTCGCTTACATGGGTGAATACTTAACCAAAAGGATAAGAGAGAGAACGTTTTCAAAGATACTCACATTTGAAGTTGGTTGGTTCGATCAGCCAGAAAATACAAGTGGTGCGGTTTGCTCTAGACTCGCCAAAGATGCCAATGTGGTGAGGTCTCTAATAGGAGATAGGATGTCTCTGTTGATACAAACTTTCTCCACTGTGATAATTGCTTGCACAATGAGCCTGGTGATTTCGTGGAGGTTCGCCATTGTTATAATAGCTGTTCAGCCCCTAATTGTAATCAGCTACTATACTAGGAGGGTCCTACTCAAGAGCATGACCAACAAGGCAACGAAGGCCCAAAATGAGGGCACCAAGCTAGCCGCAGAAGCTGTTTCCAACCTTCGTACAGTTGCAGCCTTCTCTTCCCAGGACAGAATCATCAAAATGCTAGAAAAAGCCCAAGAAGGCCCAAGACAAGAGAGCATTAGACAGTCTTGGTATGCTGGTATTGGGCTTGCTTTCTCACAGAGTATCACAGCCTGTACTTGGGCCTTAGACTTTTGGTATGGTGGGAAGCTGATGTCCACTGGCCTCATCAAAGCCGAAGCACTTTTTCAAACATTCATGGTACTAATGGGCACAAGCCGCGTCATTGCAGATGCCGGAAGCATGACTTCCGACATTGCCAAAGGCGCAGATTCTGTGGGCTCTCTCTTCGCAGTCCTCGACCGCCACACAAAAATGGACCCCGATAACCAAAACGGGTACAAGCCCGATAAACTCACGGGTCTAATAGAACTTCATGATATCCATTTCGCGTACCCGGCCCGACCCAACGACATGATATTTCGGGGGTTTTCTACGAGGATGGAAGCGGGGAAATCAACGGCATTGGTGGGTCAGAGTGGGTGTGGGAAGTCAACCATCATAGGATTAATCGAGAGATTCTACGATCCATTAAAAGGGACAGTGAGGATAGACGGGAGAGACATAAAGTCATACCACCTTAGGACCTTAAGAGAGCACATAGCACTAGTGAGCCAAGAACCAACGTTATTTGCAGGGAGAATAAATGAGAATATAGCATACGGAGCTAGGGACCACGTTGACGAATCAGAGATTGTTGAGGCAGCTAAAATAGCGAATGCTCACGAATTCATTTCAAGCTTGAGGGACGGATATGAGACATGGTGTGGGGAGAGAGGAGTACAACTATCAGGTGGTCAGAAGCAGAGAATAGCAATAGCGAGAGCGATAGTGAAGAAGCCGGCGGTGTTGCTGCTAGATGAAGCGACTAGTGCTTTAGATAACCAGTCGGAGAGGGCGGTGCAAGAGGCTTTGGAGCGTCTTATGGTGGGGAGGACAAGCGTGGTGGTGGCTCATAGGTTGAGCACCATTCATAAGTGTGATGTGATTGCTGTGTTAGAGAAGGGGAAGGTGGTGGAGAAAGGGACCCACTTGTCCTTGCTGGCTAAGGGACCAGGTGGTGCTTATTATGCTATTGTAAGTCTCCAAAGGAGGCATTCCAGTTCCATTAACCAACTCACCAGCTGA 3978 0.4786 MPRLRYNKPPWNHGRPSSSVVVAEWILPPPRAAVRVLNPINTQHRQHWTGNLLKAANLKKLRMIWGSDSKTEAMKKKKSNGSVGSIFMHADSQDWFLMVLGVLGSFGDGFTGPTVLFISGRLMNNIGGASSQMDVSAFVQNSNENAVALLYLACGSFLACFLEGYCWTRTGERQAARIRSRYLRAMLRQEVAYFDLQVTSTSEVITSVSNDSIVIQDFLSEKVPNLLTNLSMFVASYVVAFSMFWRLAIVALPFVVLLVIPGLMYGRTLTGLASKMRDEYSQAGAIAEQAISSIRTVHSFVGESKTISAFSSALQGSVKLGLKQGLAKGLAIGSNSIVFVIWSFICYYGSRLVMYHGAQGGTVFAVGAAMALGGLSLGAGLSNVKYLSEASSAGERIMEVIKRIPKIDSENMEGEILERIHGEVEFDRVEFAYPSRPDSIILRDFSMKIPAGKTMALVGESGSGKSTVISLLQRFYDPMGGEIRLDGVGIKRVQLKWMRSKVGLVSQEPALFATSIKENILFGKEDASEDEIVEAAKASNAHDFISQLPLGYDTQVGERGVQMSGGQKQRIAIARALIKKPRILLLDEATSALDNESERVVQEALDNAAVGRTTTIVAHRLSTIRNADVIAVLQNGSLIEMGSHEELIEHENGLYTSLVRLHQTEKSRTIQEDTVDVTSTSSITVSDRDMNNTSSRRLSLVPRSNSSNSIGQVRVSSADEETNVATEEKKLPVPSFRRLLALNLPEWKQATLGCFSAFLFGAIYPLFSFSMGSMVSTFFLTDHDEIKKKMKVYAFCYLGLLASSLITSISQHYSFAYMGEYLTKRIRERTFSKILTFEVGWFDQPENTSGAVCSRLAKDANVVRSLIGDRMSLLIQTFSTVIIACTMSLVISWRFAIVIIAVQPLIVISYYTRRVLLKSMTNKATKAQNEGTKLAAEAVSNLRTVAAFSSQDRIIKMLEKAQEGPRQESIRQSWYAGIGLAFSQSITACTWALDFWYGGKLMSTGLIKAEALFQTFMVLMGTSRVIADAGSMTSDIAKGADSVGSLFAVLDRHTKMDPDNQNGYKPDKLTGLIELHDIHFAYPARPNDMIFRGFSTRMEAGKSTALVGQSGCGKSTIIGLIERFYDPLKGTVRIDGRDIKSYHLRTLREHIALVSQEPTLFAGRINENIAYGARDHVDESEIVEAAKIANAHEFISSLRDGYETWCGERGVQLSGGQKQRIAIARAIVKKPAVLLLDEATSALDNQSERAVQEALERLMVGRTSVVVAHRLSTIHKCDVIAVLEKGKVVEKGTHLSLLAKGPGGAYYAIVSLQRRHSSSINQLTS 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1623 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 661 IPR027417 -
Acco06g1623 1325 CDD ABC_6TM_Pgp_ABCB1_D1_like 98 397 - -
Acco06g1623 1325 CDD ABC_MTABC3_MDL1_MDL2 1073 1313 - -
Acco06g1623 1325 ProSitePatterns ABC transporters family signature. 563 577 IPR017871 GO:0005524|GO:0016887
Acco06g1623 1325 Gene3D - 1063 1322 IPR027417 -
Acco06g1623 1325 MobiDBLite consensus disorder prediction 681 721 - -
Acco06g1623 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1062 1313 IPR027417 -
Acco06g1623 1325 Gene3D - 422 689 IPR027417 -
Acco06g1623 1325 FunFam ABC transporter B family member 4 1063 1319 - -
Acco06g1623 1325 FunFam ABC transporter B family member 1 85 421 - -
Acco06g1623 1325 Pfam ABC transporter transmembrane region 99 366 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1623 1325 Pfam ABC transporter transmembrane region 752 1020 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1623 1325 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 752 1038 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1623 1325 Pfam ABC transporter 1094 1241 IPR003439 GO:0005524
Acco06g1623 1325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1073 1310 IPR003439 GO:0005524
Acco06g1623 1325 MobiDBLite consensus disorder prediction 681 720 - -
Acco06g1623 1325 CDD ABC_MTABC3_MDL1_MDL2 424 661 - -
Acco06g1623 1325 ProSitePatterns ABC transporters family signature. 1213 1227 IPR017871 GO:0005524|GO:0016887
Acco06g1623 1325 Gene3D ABC transporter type 1, transmembrane domain 148 1040 IPR036640 GO:0005524|GO:0016020
Acco06g1623 1325 PANTHER ABC TRANSPORTER B FAMILY 68 763 IPR039421 -
Acco06g1623 1325 FunFam ABC transporter B family member 4 414 669 - -
Acco06g1623 1325 SUPERFAMILY ABC transporter transmembrane region 730 1052 IPR036640 GO:0005524|GO:0016020
Acco06g1623 1325 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 99 389 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco06g1623 1325 SUPERFAMILY ABC transporter transmembrane region 90 408 IPR036640 GO:0005524|GO:0016020
Acco06g1623 1325 SMART AAA_5 1100 1293 IPR003593 GO:0016887
Acco06g1623 1325 SMART AAA_5 451 623 IPR003593 GO:0016887
Acco06g1623 1325 FunFam Putative ABC transporter B family member 8 716 1061 - -
Acco06g1623 1325 CDD ABC_6TM_Pgp_ABCB1_D2_like 740 1056 - -
Acco06g1623 1325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 424 660 IPR003439 GO:0005524
Acco06g1623 1325 Pfam ABC transporter 442 591 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1623 Acco-ChrAcco06 11542404 11548527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1623 72 1325 Calmodulin-binding Proteins AT2G36910 43.883 0.0 1045