Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1603 ATGGCAAAGCGAAATTCAATAGTGCATGTGACCTTGGTTAGAAGGTGGGTCCATCCAAATGCCCTGAATCGTCGGGGACCAAGGACTATGAACTGCGATGATGAAGGGGTTTTAAGAAGCAGAATCGAAGTTATTGAACGCACAGTTCAATCAAGTCTCGTGTCAAAAGAAGCATCCAATTGCACTCTACTTGGATGGTTTTGGTTGTTGTGGCCTTTTCTTTTTCTACCGGGGAAACCTGAATTAGTTTTGGCTCAGGCTAGATGGCCCTTTGAGAACAAGGATGAGAATTTACCGACAAGGCTTCAGAACATCAACCTGTGCTTCCACTTCAAGGTTGAGCAACAAATCAACGTTCATTTCCTCAATTTCTTCGGATTCAATGGAACAGGAAGTGTGTTTGGAGGATTACGGCTTTGGAAGAGTCAGGGAGGGGGGTGGCTAGAGGGAACCACAGTTGAGGACATGGATATAGCTCACTTGAAAGGGTTTAAGTTCATCTTCCTTAATGACGTCAAAGTGCTCTATGAATTACCTGGGTCTTATGAAGCTTACAAGAAACAATAA 567 0.4374 MAKRNSIVHVTLVRRWVHPNALNRRGPRTMNCDDEGVLRSRIEVIERTVQSSLVSKEASNCTLLGWFWLLWPFLFLPGKPELVLAQARWPFENKDENLPTRLQNINLCFHFKVEQQINVHFLNFFGFNGTGSVFGGLRLWKSQGGGWLEGTTVEDMDIAHLKGFKFIFLNDVKVLYELPGSYEAYKKQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1603 188 SUPERFAMILY Nucleotide-diphospho-sugar transferases 79 187 IPR029044 -
Acco06g1603 188 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 62 175 IPR029044 -
Acco06g1603 188 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 75 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1603 Acco-ChrAcco06 11388004 11389810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1603 79 188 REM Transcription Factor Family AT2G24630 72.566 7.99e-45 155