Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1595 ATGGAACAATTATTGTTTGTGTGGATAATCTTTTTGTCATTCCTTCTCCTGAACACTAGCAATTGTGTGGAGGACGAAGTCAGCAGCACACTGATAAACCTTCTTGCAAAACTCTATAACAACAATGGCCGCCAGAACTCTAATTTGGCTTGGAAGCCAGGCTCTGATCCCTGCAGGGACTTGTGGCAAGGTGTAGTGTGTGACGATAGAATTCCATCAGTACAGAAGCTGTTTCTTAACAGGTCCAGTTTAGCTGGATCTCTTGATGTTGATATGCTTTGCAACTCGCAGCCCCTTGCTGCGTCTCTTACATCTCTTAACCTCGATGGCAACAACATAAGTGGAGGCATTGCAAATGAGGTTGGAAACTGCAAGCATCTCAGTCACTTGAATGTAAGTGGTAACCAACTATCTGGGATCCTTCCTAGCTCACTTGCCATGTTGAGTAACTTAAAAGAACTTGACATCTCCAATAATAGGTTCTCGGGGAAATTGCCAAACTTGTCCTCGTTATCTGGATTGAATGTCTTTTTGGCACAAAATAATCAGCTCACGGGAGAGATACCCCCTTATAACTTTTCCAAATTTGATTACTTCAATGTATCCTTCAATGATTTAAGTGGTCCCATTCCAGATTTGCAAAACCATTTCTCTGCGGATAGTTTCTTCGGAAATCCTGAGCTTTGTGGAAACAACTTGCCAAAAAGCTGCTCATCTAACCCTATATCTGATGCCAAACCACCTGATTCAGAAGAAACGAAGGGTCCTTCTAAAAGCCAGATTCTTATTTATTCAGGCTATGCTATACTGGGTTTGGTTTTTATCCTTTTAGTAGTTCTTGCGTTGTGCACAGGAAACATGACGAGAAACAAGGTTGAAGCAGAAAAAGAGGCAACTGATGACAGTACCATTGACAAGCCTAGCTATCTTTCAAGCGAGTACAAATCAAGCTTGAGCAGACCCGTGGTATCAGTCACTACTGAAAGTGGGATGGTTTCACAATCACTTGTTGTTCTTTCAAGGCCAAATGTAAATGATATTACATTGGAGGACTTGATGAGGTCCCCTGCTGAACTGATTGGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTGATGCTGGACAATGGGATGATGGTTGTTGTTAAGAGGATTAACGACTTAAATATATCAAGCCATGAATTCAAACAAAGGATGCAAATGGTAAGCCAAGTGCAGCACCATTATGTACTCTCACCTCTCGCTTTCTATTGTTCCAAACAAGAGAAACTTTTGGTCTATGAATATCAGGAGAATGGAAGTTTGTTCAAGCTTCTACATGGTTCCTCAAAAGACTTTGATTGGACCTGTAGACTTGGGATTGCAGCCACAGTTGCAGGGGCATTAGCTTTCATGCATCAAGAGCTCGAAGAATGTGGGATCAGGATCGCGCATGGTAACTTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGACGCCTGCATAAGCGAGTATGGCGCTACGGTTATGGATGATCGAGAACTCAAAATTCAACAGAGTTCTTCTTTTGCCAGTTCTTATGCTGCTGGTGCATCAGATGTCTTCAAGGGGGATGTTTATGGCTTTGGAGTGATTCTTCTGGAACTACTTACTGGGAAGTTAGTGAAGAGCAATGGGATGGACTTGACTGAGTGGGTTGAGTCTGTTGTAAGGGAAGAATGGACGGGTGAAGTGTTTGACAGGTCCCTGATATCAGAATATGCAAGTGAAGAGAGGATGGTAAACTTGCTTCAAGTGGCGATAAAATGTATTAATCATTCTCCAGAGGCTAGGCCAACTATGAACCAAGTTGCTCTCATGATCAACGCCATAAAAGAGGAAGAAGAGAAATCCTTGATTTATGAAGCATGA 1890 0.4206 MEQLLFVWIIFLSFLLLNTSNCVEDEVSSTLINLLAKLYNNNGRQNSNLAWKPGSDPCRDLWQGVVCDDRIPSVQKLFLNRSSLAGSLDVDMLCNSQPLAASLTSLNLDGNNISGGIANEVGNCKHLSHLNVSGNQLSGILPSSLAMLSNLKELDISNNRFSGKLPNLSSLSGLNVFLAQNNQLTGEIPPYNFSKFDYFNVSFNDLSGPIPDLQNHFSADSFFGNPELCGNNLPKSCSSNPISDAKPPDSEETKGPSKSQILIYSGYAILGLVFILLVVLALCTGNMTRNKVEAEKEATDDSTIDKPSYLSSEYKSSLSRPVVSVTTESGMVSQSLVVLSRPNVNDITLEDLMRSPAELIGRGKFGSLYKVMLDNGMMVVVKRINDLNISSHEFKQRMQMVSQVQHHYVLSPLAFYCSKQEKLLVYEYQENGSLFKLLHGSSKDFDWTCRLGIAATVAGALAFMHQELEECGIRIAHGNLKSSNILLNKNMDACISEYGATVMDDRELKIQQSSSFASSYAAGASDVFKGDVYGFGVILLELLTGKLVKSNGMDLTEWVESVVREEWTGEVFDRSLISEYASEERMVNLLQVAIKCINHSPEARPTMNQVALMINAIKEEEEKSLIYEA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1595 629 SUPERFAMILY Protein kinase-like (PK-like) 357 613 IPR011009 -
Acco06g1595 629 ProSiteProfiles Protein kinase domain profile. 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1595 629 Gene3D Phosphorylase Kinase; domain 1 324 428 - -
Acco06g1595 629 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Acco06g1595 629 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
Acco06g1595 629 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Acco06g1595 629 PANTHER OS05G0588300 PROTEIN 5 619 - -
Acco06g1595 629 FunFam Leucine-rich repeat receptor protein kinase EMS1 93 191 - -
Acco06g1595 629 Gene3D Transferase(Phosphotransferase) domain 1 430 628 - -
Acco06g1595 629 Gene3D Ribonuclease Inhibitor 21 211 IPR032675 -
Acco06g1595 629 Pfam Protein kinase domain 358 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1595 629 SUPERFAMILY L domain-like 48 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1595 Acco-ChrAcco06 11318388 11320380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1595 28 618 Receptor kinase-like Gene Family AT1G68400 34.554 2.24e-89 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco06g1595 Pkinase 9.1e-24 CL0016