Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1589 ATGGAATCCATTTTATCCGTGATATTGTTATTTGTGGGGTTAGGGGTCTTGATCCTACTTCATGTCTGTTTAATTATGATAGAATCCAGAAGAAGAGGCAGAGGCACAAGGACGGAGAGTGAAACCACCGATGAAGCACGAAGCATGTCAAAAGATGAAATAGAACAGCTTCCTTGTTATGATTATGCAGCCAAAGAGAGTGAAACTAGTACTGTGGAATGTGCTGTGTGCTTGGAGAATCTGGTTACAGGGGATAAGTGCAGATTATTGCCTACGTGCAAGCACACTTTTCATGCCCACTGTTTGGATCAGTGGCTTCCTCAGACACCCATATGCCCTATTTGCAGGGCCAGTGTTGGCTCTCGGAGGGAATGCTTTGCTATAGATATAAATCAGAACGGCCATTTTGAGCCAAACAGTAGACGGTTGAGAAAAAGCCCAGAAATTTGTTTTACAATGCAGTCCACAGAGAATTCAATTCCTGAAGGTCGGCTTCCAAGATTGGTATACCACGGCATGAGCTCCTACGCCGATGCCATTACCAGAGAAGCTGTTATATCTGGGATCTATTATGGGCCCCAGCCTGAGGATGAGCCAGTCAAGTTGAACCGGTTCCCGTGGATCCAGGTCAGCAAGAACGAGTTCGACCCCGAGTGGACCCGAAAAACCTTGCTCATGGGCGATGTTCCTGACGCTGCTAAGGTCATTAAAGCGATGTTCAAGTGGAATGAGAATAAATTGAACCCTCTCTAA 753 0.4595 MESILSVILLFVGLGVLILLHVCLIMIESRRRGRGTRTESETTDEARSMSKDEIEQLPCYDYAAKESETSTVECAVCLENLVTGDKCRLLPTCKHTFHAHCLDQWLPQTPICPICRASVGSRRECFAIDINQNGHFEPNSRRLRKSPEICFTMQSTENSIPEGRLPRLVYHGMSSYADAITREAVISGIYYGPQPEDEPVKLNRFPWIQVSKNEFDPEWTRKTLLMGDVPDAAKVIKAMFKWNENKLNPL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1589 250 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 157 - -
Acco06g1589 250 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Acco06g1589 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 121 IPR013083 -
Acco06g1589 250 SUPERFAMILY RING/U-box 73 123 - -
Acco06g1589 250 Pfam Ring finger domain 73 116 IPR001841 -
Acco06g1589 250 SMART ring_2 74 115 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1589 Acco-ChrAcco06 11258350 11260830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1589 45 119 C3H Transcription Factor Family AT1G74410 42.667 5.89e-18 78.2