Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1588 ATGATGGAACTCACCGATTCCGGCGACGAACTCAGCGACCATAAGCTGCCTCAGGATTCTCGCTCTGGACTCGGAATCGACCTCAATGAGATCCCCTCTCCTTCTTTTGCCGAAACCCTACCGGACTCCATCGACATCGTACGTGCGTACCACGAGAACCCGGCCCCTCCGCCCGGCGGACCGGCGGGGATTCCCGGTGACGTCCGCGGCTCCACTTGTGCTGCCTGTGGTAAGCCCGAGGCGCGGGGTCATGTTGTGGTCTGTGACGGGTGCGAGCGCGGTTACCATTTGGGCTGCGCGGGAATGCGTGGGCGCCAGGCCGTAAACATTGACGAATGGGTTTGTGGAGAGTGCGTGTCTAGCGGGGTCAAGAGTAAGCGTTGGCCATTGGGTGTCAAGTCCAAGCATCTTTTGGACATCAATGCTTCGCCACCCAGCGATGCCGACGGCGAAGGTAGTGAAGAATTGCAGGATTTGAGAAAGCACACTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGCGCCCCATTGACATATTCAACCTTCTTCAATGGTAATGCCATTGGCTTCCAAAAAGCATCTGGAGTTGTGACACATGCTGTTAGAGTGGGTTTTGAGGATGTACTGAATCATACACAATCAGTGACTAGAAATTTTGAGGAGGTAGATATGGGTTTGCCTCCTGGAAGGCATAGGAATAGTAAAAATACGGCTAGTGGGAATCCAGGAGATGTAATTTTGCAAGCTCTCAGAGATTTTATATCTGAAAGGCATGGTGTTCTGGAGGAAGGCTGGAAAGTGGAGTTTAGACAACCAATGGGCAACGCTGAGCTGTATGCTGTTTACTGCGCACCGGATGGAAAGATTTTTGATTCTGTGTTTGATGTAGCGTGTTATCTGGGGTTAATGCCTGGCTACAACTCTTTGGAGTCTGAAATGAGAAACAATAGGGCTGTCTCTTCATTAGGTGGGTCTCATTTAACCAGGAAAAGAAAGTCAGCTAGACTCCCAGTCGTTAATGGCTTTGCTGAAAGAAGGGAAAGCTTTGCCAATAGTTGTTTTAAAGATCCTCCTTCGGACACTGCAGGTGCAGAGTGTGCTAATTCATGTGGGAACATATCAGAAGCTACATTGAGTGGAAGGAAAGAGGATGATCACTCTGGCCCTCAGCAATATGCCGATGGCCTTCCTTTACAGTTTGAAGATTTTTTTGTTCTTTCTTTGGGGAAGGTTGATGACAGACCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTATAAATCTTGCTGGCACGATCAAATTACAGGCTCCATTTTTACATGTGAAGTTCTGGATGGTGGTGATTCTGGACCTATGTTTAGGGTCAGAAGGTGTCCTTGTTCTGATTTTTCTATTCCAGTTGGGTCAACCATTCTCTCATTGTCAAACCCTTGTCAATTTGTGAGTCATACCAATGAAGGTGAGGGAAAGATGCATGATAATATGGAATGTGATGATGATGAAAGTATCCAGATGATCCTGGACGACTCTTGCAATCCAACAGAAAATGATATCTTGAGTTGTCTTGAAAGTTGCTCTAGTGAAGCACGTGATAGCCATACATTAGATGTATCGCAGTCTGCAGCTGGTCCAGTTCAAGAGGAAACTCATAATTTGTCTGATGACTTGAGGTCAATTGGTGAGATTATGGTTGAACAGTGTTCATCATCCTCAGCATGGAAGGATATTTCCCAAAAATTAGTGAATGCTTGCAGTGAAATATGCAAGCAGAAAGGGACTGTAAAGCTCTATTGTAAACATGCTGAAAATGAAACATGCGTATATAAATGGGATGTAAAGAATGGCAAAAATGAAACACACCTCACTTCATTTGCTAAATTTTGTGGGTCCCCTGCTCTTGGTATCCCTGCCATGGTTCAGGCAGATAATGATCTTGAAAGTTTGAATGAGGTCTTAGGAAAATGGTTGGAGAAGGATAGATTTGGGTTAGATGTTGAGTTTGTCCAAGAAGTGCTCGAGCTGGGCCCTGGTGTTGAAGGACTCTCACAGTATGAATTTCTGAATACCAGAATTAATGGCTCTTCTTTGCTAACAGTTGGAAATGGGTTCTTAGTGGCTGATTGGAGAGACAGATCCCAATATCAGGAAGAAGCAGTGCAAGGTTTATATAGGGGACGCAAGAAAGTAAAACTGGCCAAAGAATGTGCTAAGGAAGATCGCTGTCCTCCTCCTGGGAAGCCACTATCCTCTAGGGTTCCTTTCGAACTTGTTGGTGATGTTTTTCAGGCTTGGGAGCTATTACGCAGATTTCATGAAATTTTGGGCCTGAAGGAACCTTTGTCATTGGATGAGCTGGAGAAGGAACTTGTTAACCCATGGTTTAATGGATCAGTCGATAGTGAAAAACTTGAGGGTGATGGCAGTGGTGGACCAATATTATCCCCAAACTGTGAAGCTGCTCCTTCAGTTTCTGCTGAAAGTCCCCATGCATTTATTCAAGTGGAAACTGAAGCCATGAAAGAGGCAGCTCAAGTTAAGCTTGCATCGTTCACTTACACCAGATGCTTTGGTGCATCTTTGACAAAGGCTCATAATTCCTTGCTAGAGGTTTTAATAGGTGAACTGCAATCCAAAGTGGCTGCCCTGGTGGATCCAAATTTTGATCCTGGAGAGCTGAGAACAAGACGTGGAAGGAGGAAAGACATAGATAGTACTGTTCCCGCCAGACGAGCCAAGCTCAATATGCTTCCTATTAATGAACTAACTTGGCCTGAATTGTCTCGTAGATACATATTAGCTTTCTTATCAATGGATGGTAACCTTGAGTCGCCAGAGATTACTGCACGGGAAAGTGGTAAAGTATTTCGTTGCTTACAAGGTGATGGTGGTTTGCTTTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCATTGTTGCTTGCGGAGGCTACAAAGAAAATTTTTGGGTCTGTGAGCAGTGAAAGTGATGTGCTTACCTTTGAAGATGAGGAGTTAGATGCAAAGGATGCTTGTGAGAAAACTCTGGTGAATGATGGTAATATTCCAGAATGGGCACAGGTTCTGGAACCTGTAAGAAAACTACCTACAAATGTGGGAACCAGAATCAGAAAGTGTGTCTATGATGCCTTACTTAAGGATCCACCAGAGTGGGCTAGGAAGATACTGGAACACTCAATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCTACAAAGAAAGCTGTTCTTTCTGTATTGGCTGATGTATGTGGTGAAGCACCGCAACAGAAGCCCAGTAAAGCAAGGAGAAAAAAGACTGTAATATCTATTTCTGACATTATCATGAAACAATGTCGCATTGTATTACGCCGTGCTGCTGCTGCAGATGATTCCAAGGTTTTTTGCAATTTGCTGGGACAAAAATTAATAAATTCTTCTGATAATGATGATGAAGGGCTTCTTGGATCTCCAGCCATGGTGTCTTGTCCGCTTGACTTCAGGACCATCGACCTACGATTGGCTGCTGGGGCTTATGGTGGATCTCATGAGGCTTTTCTTGAGGATGTTCATGAGCTGTGGAACAATGTTCGTATTGCTTTTGGGGATCAACCTGATTTAGTTGAGCTGGCTGATAAATTATCCGAGAATTTTGAATCGTTGTATGATAGTGAGGTTTTAACTTATGTGCAAAGGTTTCGAGAGTATGCCAAATTGGGAAACCTAACTACAGAAATGAGGAAACAAGTGGAAAATTTTCTTGCATCAATTAGTGAAATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTTTGCTTTGTGATACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTGAAGGAAACTGGTACTGTCCTTCTTGTGTTGACAATAGGCATGCTGTTCAAGATGTTTCACAATGTTCAAAACTTATTGGCAAACCAAGAAGTAAAAAATTCAAGGGGGAGGTTACTTCGCTTTACTTGGAGGCTCTTTCTCATCTACTATCTGTAATGGAAGAGAAAGAATACTGGGAGTACAGTGCGGGCGAGAGAACTATCCTTCTCAAGTTTTTATGTGACGAGTTGCTCAACACTTCCCTCATACGCCAGCACCTTGAGCAATGTGCTGAGTCATCTGCTGAATCACATCAGAAGTTGCGTGCACTCTCTGCAGAGTGGAAAAGCCTGAAAATTAAAGAAGAGATATTATCCACTAAAGCTGCAAAAATTGACACATGCTCAGTGGCAACTACTGAAGAAGAAGTCCTCAAGGAGGGGCTCCCTGGATCACTATCAAATCCTGGTAAATGTCTGGTTCAGCCACATAGTGTGAGTGACAGTCCTAACAATTTTGGGGTATTTGCAGATGGTTTGCATTCGGAAGAAATAAATAGAGAGAAAAATGGGTTTAACTGTGTTGATAAAAGTGTCTCTGCAACAAATTCAGAGACTGATAGTCAAAACAGGAATCCCATAAATATGGAAGGACAGTTGAAGAATGTCTGTGCAGCTGTGGATGGCAGTCAGTTGCCTACAAATATGACTTCCTGTGTGGATTCTCAATGTAGTGATAAGTCTACTAATCCTTTTTCAAGGGCAAATAATATGCCTCAAGAAATTAACAGCTCTGGTGGAGCAGTTCATATCCTGGGTAACCGGCAGAAATGTGTGGGAGGAGATACAACTCTTGATCTGCATGAACAAGGTGTTCCTTTTGATTTTCCGAAGTCTGCTGTAAATGAATCAGAACAATATCACCTCGAGCTCAATGCTATCAGACATGATATCTCACTTCTTCAAGACTCAATAACTAGTATTGAATCACAGCTGCTAAAGCTTTCTGTACGTCGGGAATTTTTGGGAATTGATTCACTTGGTCGCTTCTACTGGGCTTCAGTAATGCCTGGTGGAAGTCCATGTATACTTGCTGATTCAACTTCTCTGATGTTGCATGAGGGAAGAATGAACAATAGCAGAGACCCTGTGGACAAGATTTCTGCTACGAAGAATTGTGCTCTATCTGGCAAGGATACCTATCAGATGTTAGGGCTGATAAAAGATTTATCTCCTTTAATGTCTCTACCAAGAAATACTGTAGGCTGTAATTTACCATGGGTTGTTTATCAAACTGATGCTGATATTGAAGAGCTCTTGTGTTGGCTGAAGGATATTGACCCAAGAGAAAGAGAACTTAAAGATTCGATTATGATTTGGCAAAAGTCAAGATTCCAAGAGCTTACTCATATTCAGAATGAAGATCAAGTTGAGCCCCAGGGATCTTTTCCTTTGCCAGGGGATAGAGAGAGAGTAGTGTCTGATTCTCTTGTTACAAAGGCAACCTCCTTGATAGAGAAGAAATATGGCCCATTTTTAGAGTTGGGTAACCTTGAGGCATTGAAGAAGCGGGGTAAAAAGGTAAGAACATCTAATGATGATAAGTTGTATAGGTGCCAATGCCTAGAACCCATATGGCCTTCTAGGCAACACTGCGTTTCTTGTCACAAAACCCTTTTGAATGATGTTGAACTGGAGGGACACAATGATTGCAAATGTAGTTCTGCTTTGCTTACCTCAGAGAAGAGTAAAGATATCAGTGGATCTTCTAAAGGGAGAGGTAATTTGAAATTTGAGACCACCCTTGGAAAAGTCAGAGGTAATGCCGAAACAGGTGGAACCTCTACAAGTGGAGGTTCTGAGCTTTGCTCAAGATTGATTAAGTTTTCGAATCAAGACTCAACATGTCCGTATAACTTTGAAGATGTCTGTTCCAAGTTTGTGACTGAAGACTCCAACAAGGAACTTATCAAAGAAATAGGTCTCATTGATTCAAATGGGATCCCATCCTTTGTTCTTTCTGTATCTCCTTATGTAAGTGATTCTACAGTTATGCTAATATCAAACAAAAAGGATGAATATGTTGCTGGTGGGTCCAAGGCTTCTGAGGGGAAGATTCCTGAAGGAAATGAGGGAAGTGGCATGTGCCATGACCGTATATCAGGAATTCCTATTCGAAGTTCCAATGTGTATGAAAACAATAAAGCAGGAAAATCCAGTAGATCAACTCTGGGATCTTCAGGACAAAGGGATGGAAAATCTTTATTTTCTGTTCCTGCTTCACAAGTGGGCTCTGACACTTGCTGTGTGGTACCTCAATCTTCATTGAGACCATTGGTTGGAAAAGTTTCCCATATTTTGAGGCTATTGAAGATTGGCCTACTTGATATGGATGCTGCACTACCTGAAGTTGCTTTGAGGCCATCAAAAGCACAACTGGAAAGAAGACAGGCTTGGCGTGCATTTGTTAAATCTGCAAGGACTATATATGAGATGGTTCAGGCGACAATCACACTAGAGGGCATGATTAAGACTGAGTACTTAAGAAATGACTGGTGGTACTGGTCATCACTCTCAGCCGCTGCCAAATCTTCTACTTTGTCATCCCTTGCCCTTCGAATTTACACCCTTGATTCAGCCATTATGTATGAGAGAATGGCAAGTTCAAGTTTTACTGATTGCTTGGAACCTTCTGCAGTAACAGAACATAAAGCACCAGCCACTTTGGATGCAGAAAAATCCAAAGCAATACGGAAATCAAGCAGGAAAAGGAAGGAGCCAGATGGTTAA 6699 0.4316 MMELTDSGDELSDHKLPQDSRSGLGIDLNEIPSPSFAETLPDSIDIVRAYHENPAPPPGGPAGIPGDVRGSTCAACGKPEARGHVVVCDGCERGYHLGCAGMRGRQAVNIDEWVCGECVSSGVKSKRWPLGVKSKHLLDINASPPSDADGEGSEELQDLRKHTQGHNSFSANSFGAPLTYSTFFNGNAIGFQKASGVVTHAVRVGFEDVLNHTQSVTRNFEEVDMGLPPGRHRNSKNTASGNPGDVILQALRDFISERHGVLEEGWKVEFRQPMGNAELYAVYCAPDGKIFDSVFDVACYLGLMPGYNSLESEMRNNRAVSSLGGSHLTRKRKSARLPVVNGFAERRESFANSCFKDPPSDTAGAECANSCGNISEATLSGRKEDDHSGPQQYADGLPLQFEDFFVLSLGKVDDRPSYCDANIIWPVGYKSCWHDQITGSIFTCEVLDGGDSGPMFRVRRCPCSDFSIPVGSTILSLSNPCQFVSHTNEGEGKMHDNMECDDDESIQMILDDSCNPTENDILSCLESCSSEARDSHTLDVSQSAAGPVQEETHNLSDDLRSIGEIMVEQCSSSSAWKDISQKLVNACSEICKQKGTVKLYCKHAENETCVYKWDVKNGKNETHLTSFAKFCGSPALGIPAMVQADNDLESLNEVLGKWLEKDRFGLDVEFVQEVLELGPGVEGLSQYEFLNTRINGSSLLTVGNGFLVADWRDRSQYQEEAVQGLYRGRKKVKLAKECAKEDRCPPPGKPLSSRVPFELVGDVFQAWELLRRFHEILGLKEPLSLDELEKELVNPWFNGSVDSEKLEGDGSGGPILSPNCEAAPSVSAESPHAFIQVETEAMKEAAQVKLASFTYTRCFGASLTKAHNSLLEVLIGELQSKVAALVDPNFDPGELRTRRGRRKDIDSTVPARRAKLNMLPINELTWPELSRRYILAFLSMDGNLESPEITARESGKVFRCLQGDGGLLCGSLTGVAGMEADALLLAEATKKIFGSVSSESDVLTFEDEELDAKDACEKTLVNDGNIPEWAQVLEPVRKLPTNVGTRIRKCVYDALLKDPPEWARKILEHSISKEVYKGNASGPTKKAVLSVLADVCGEAPQQKPSKARRKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGQKLINSSDNDDEGLLGSPAMVSCPLDFRTIDLRLAAGAYGGSHEAFLEDVHELWNNVRIAFGDQPDLVELADKLSENFESLYDSEVLTYVQRFREYAKLGNLTTEMRKQVENFLASISEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDNRHAVQDVSQCSKLIGKPRSKKFKGEVTSLYLEALSHLLSVMEEKEYWEYSAGERTILLKFLCDELLNTSLIRQHLEQCAESSAESHQKLRALSAEWKSLKIKEEILSTKAAKIDTCSVATTEEEVLKEGLPGSLSNPGKCLVQPHSVSDSPNNFGVFADGLHSEEINREKNGFNCVDKSVSATNSETDSQNRNPINMEGQLKNVCAAVDGSQLPTNMTSCVDSQCSDKSTNPFSRANNMPQEINSSGGAVHILGNRQKCVGGDTTLDLHEQGVPFDFPKSAVNESEQYHLELNAIRHDISLLQDSITSIESQLLKLSVRREFLGIDSLGRFYWASVMPGGSPCILADSTSLMLHEGRMNNSRDPVDKISATKNCALSGKDTYQMLGLIKDLSPLMSLPRNTVGCNLPWVVYQTDADIEELLCWLKDIDPRERELKDSIMIWQKSRFQELTHIQNEDQVEPQGSFPLPGDRERVVSDSLVTKATSLIEKKYGPFLELGNLEALKKRGKKVRTSNDDKLYRCQCLEPIWPSRQHCVSCHKTLLNDVELEGHNDCKCSSALLTSEKSKDISGSSKGRGNLKFETTLGKVRGNAETGGTSTSGGSELCSRLIKFSNQDSTCPYNFEDVCSKFVTEDSNKELIKEIGLIDSNGIPSFVLSVSPYVSDSTVMLISNKKDEYVAGGSKASEGKIPEGNEGSGMCHDRISGIPIRSSNVYENNKAGKSSRSTLGSSGQRDGKSLFSVPASQVGSDTCCVVPQSSLRPLVGKVSHILRLLKIGLLDMDAALPEVALRPSKAQLERRQAWRAFVKSARTIYEMVQATITLEGMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYTLDSAIMYERMASSSFTDCLEPSAVTEHKAPATLDAEKSKAIRKSSRKRKEPDG 2232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1588 2232 MobiDBLite consensus disorder prediction 2034 2054 - -
Acco06g1588 2232 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1354 1398 IPR028942 -
Acco06g1588 2232 SUPERFAMILY FYVE/PHD zinc finger 1260 1325 IPR011011 -
Acco06g1588 2232 Pfam Methyl-CpG binding domain 253 305 IPR001739 GO:0003677
Acco06g1588 2232 ProSiteProfiles Zinc finger PHD-type profile. 1272 1322 IPR019787 -
Acco06g1588 2232 SMART PHD_3 72 119 IPR001965 -
Acco06g1588 2232 SMART PHD_3 1274 1320 IPR001965 -
Acco06g1588 2232 ProSiteProfiles Zinc finger PHD-type profile. 70 121 IPR019787 -
Acco06g1588 2232 MobiDBLite consensus disorder prediction 139 158 - -
Acco06g1588 2232 CDD PHD_SF 72 118 - -
Acco06g1588 2232 SUPERFAMILY Bromodomain 1109 1228 IPR036427 GO:0005515
Acco06g1588 2232 ProSitePatterns Zinc finger PHD-type signature. 73 118 IPR019786 -
Acco06g1588 2232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1233 1333 IPR013083 -
Acco06g1588 2232 ProSiteProfiles FYR domain FYRN motif profile. 396 449 IPR003888 GO:0005634
Acco06g1588 2232 ProSitePatterns Zinc finger PHD-type signature. 1275 1319 IPR019786 -
Acco06g1588 2232 Pfam Bromodomain 1163 1217 IPR001487 GO:0005515
Acco06g1588 2232 PANTHER OS02G0192300 PROTEIN 12 2228 - -
Acco06g1588 2232 Gene3D - 1116 1232 IPR036427 GO:0005515
Acco06g1588 2232 CDD PHD1_Lid2p_like 1274 1319 - -
Acco06g1588 2232 Pfam PHD-finger 1274 1320 IPR019787 -
Acco06g1588 2232 Pfam PHD-finger 73 120 IPR019787 -
Acco06g1588 2232 MobiDBLite consensus disorder prediction 2209 2232 - -
Acco06g1588 2232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 138 IPR013083 -
Acco06g1588 2232 Gene3D - 397 682 - -
Acco06g1588 2232 MobiDBLite consensus disorder prediction 2208 2232 - -
Acco06g1588 2232 SUPERFAMILY FYVE/PHD zinc finger 71 130 IPR011011 -
Acco06g1588 2232 MobiDBLite consensus disorder prediction 1 25 - -
Acco06g1588 2232 MobiDBLite consensus disorder prediction 223 242 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1588 2 2232 C2H2 Transcription Factor Family AT3G01460 45.415 0.0 1774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco06g1588 MBD 2.2e-09 CL0081