Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1575 ATGCTCTCTCTGCAATTCCTCGCCCCCGGAGCTCTCGATCGTCCTTTGCCATTGCTGCCGGGTGGCAATTCGTCCTCGTTTTGGGCCAAGGATCGGTGCTTGCTCAAAGCAAGTCCTTCAATTGCTGGTCGAAAGAAGCTTCGATTCAATGGCGGAACTGTTAGGGTTTTGGCAATGTCAGGGGATTCTTCTGCATTCAAGATGAATCTAAACGAGTACCTGGTCACTCTGGAAAAACCACTAGGTATCCGGTTCGCCGTCACTGCTAACGGAAAAATCATAGTTCACTCCCTTAAGAAAGGGGGTAATGCAGAGAAGTCAAGAATTATAATGGTCGGGGACACTTTGAAGAAAGCAGGTGACTCATCACAAAATAGGCTTGCTGAGATTAAGAACGTCGAAGATGCGCAGAATATATTGAAGGAGCAAATTAATCCTTTAAGCATGGTTCTTGAGAGGCCCAGATCTCCTTTTCCTATTCATCTACTGCACAAGATAAATGATTCTGAAGTACAATTCAATAGAGGTCAAGTTCCGATTGCCACCTGGAACAAGACATTATTGGCTTCAAATTTACAGCCATCTGTTGAAAGCTCTGGGAATAGTGGTTTTTCTACCTTCAACGAAAAGTTTCTAACTCCAAAAGGAAGTGAGTTATTGGGCAATCCAAATGAACAGGTCATCCTAAATGAGGAGATAAAATTCTTTAGTGATGAAGAGAATAAGGAAGGAGAGTGGGCTCATGGAAGTTTCCCACTTGAGGAGTATGTCAAAGCTCTAGATCGTGCAAAAGGCGAGATGTACTATGATCACTCCCTCAGTATGCGCTATACTAAGATTTCGGAGCAAATATATGTGGGATCATGTATTCAAACGGAAGCTGATGTGGAAAAATTGTCAAAGGTTGAGGGAGTCACTGCTGTTCTGAACTTCCAAAGTGCAACTGAAGCTGAGAATTGGGGAATTGATTTCAGATCTATTAATGAATCATGTCAAAGGAATAATATCCTCATGATAAGCTATTCTATACGGGTAGGAGATTCTTATGATATGAGGAAGAAACTACCATTTTGTGTGGGGCTTCTCTTTCGGTTGCTGAGGAAAAGCCACCGCATTTTTGTTACATGTACCTCTGGATTTGATCGATCTCCAGCTTGTGTGATTGCATACCTGCACTGGATGACAGATCTTTCCCTCCATGCAGCTTATACATGGGTCACTGGGATGTACACATGCAGGCCTGACAGGCCAGCAATTGCCTGGGCAACTTGGGATCTCATAGCTATGGTTGAAAAGGGTAACCATGATGGACCCCCTACACATGCTGTCACATTTGTATGGAATGACAATGAGGGGAAGGATGTAACATTGGTGGGGGATTTTACTGGAAATTGGAAAGAACCAATTAAAGCAATGCACAAGGGTGGAATGAGATATGAAGGGGAAGTAAAACTTCCTCAAGGAAAGTACTACTATAAGTTTATTGTTGATGGAAACTGGAGGCATTCAACCGCTTCACCGGCAGAGAGGGATGAAAGTGGGAACGTTAACAACGTAATTGTTATTGGTGATACTGCTAGTGTTAGGCCTTCTGTTCAACACCAGCCGAAAGATGCCAACGTTGTGAAAGTGATCGAGAGGCCTCTGGATGAAAAAGAACGGTTTAAGCTGGCGAAAGCAGCTCGCTGCATTGCTTTCAATGTATGTCCTATTGCGTTGACTCCCAAGTCGCAAGTAGTTGCATAG 1746 0.4359 MLSLQFLAPGALDRPLPLLPGGNSSSFWAKDRCLLKASPSIAGRKKLRFNGGTVRVLAMSGDSSAFKMNLNEYLVTLEKPLGIRFAVTANGKIIVHSLKKGGNAEKSRIIMVGDTLKKAGDSSQNRLAEIKNVEDAQNILKEQINPLSMVLERPRSPFPIHLLHKINDSEVQFNRGQVPIATWNKTLLASNLQPSVESSGNSGFSTFNEKFLTPKGSELLGNPNEQVILNEEIKFFSDEENKEGEWAHGSFPLEEYVKALDRAKGEMYYDHSLSMRYTKISEQIYVGSCIQTEADVEKLSKVEGVTAVLNFQSATEAENWGIDFRSINESCQRNNILMISYSIRVGDSYDMRKKLPFCVGLLFRLLRKSHRIFVTCTSGFDRSPACVIAYLHWMTDLSLHAAYTWVTGMYTCRPDRPAIAWATWDLIAMVEKGNHDGPPTHAVTFVWNDNEGKDVTLVGDFTGNWKEPIKAMHKGGMRYEGEVKLPQGKYYYKFIVDGNWRHSTASPAERDESGNVNNVIVIGDTASVRPSVQHQPKDANVVKVIERPLDEKERFKLAKAARCIAFNVCPIALTPKSQVVA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1575 581 Gene3D Protein tyrosine phosphatase superfamily 269 534 IPR029021 -
Acco06g1575 581 SUPERFAMILY E set domains 440 523 IPR014756 -
Acco06g1575 581 CDD E_set_AMPKbeta_like_N 443 522 - -
Acco06g1575 581 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 270 408 IPR029021 -
Acco06g1575 581 Pfam Glycogen recognition site of AMP-activated protein kinase 443 524 IPR032640 -
Acco06g1575 581 CDD DSP_laforin-like 275 421 IPR045204 GO:0019203
Acco06g1575 581 ProSiteProfiles PDZ domain profile. 74 155 IPR001478 GO:0005515
Acco06g1575 581 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 48 573 - -
Acco06g1575 581 Gene3D Immunoglobulins 430 526 IPR013783 -
Acco06g1575 581 SUPERFAMILY PDZ domain-like 68 160 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1575 Acco-ChrAcco06 11133654 11139593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1575 139 577 Protein tyrosine phosphatase (PTP) family AT3G01510 63.556 0.0 605