Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1572 ATGCCTCAAAGACCAAAAAGGAGGATACAGTTTAGCAAACTATATTCATTTTCGTGCTTAAAATCCCCTTTCAGACATGAACAGTCTCAGATTGGGCAGAGAGGCTACTCAAGGGTCGTATATTGCAATGACCCTGATAACCCAGAAGCTGTTCAGTTGAATTACGTAGGAAATTATGTTTCAACCACAAAGTACACGGCATTTAATTTTATTCCCAAGTCTTTATTTGAGCAGTTTAGAAGGGTTGCAAATATCTACTTTCTCATTGTGGCGTGTCTTTCGTTTAGTCCATTGGCTCCTTTTACAGCTTTAAGTATTGTTGCACCGTTGCTGGTGGTGATGGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGAAGAAAACAGGATATTGAAGCAAACAGCAAAAAGGTTAATGTACTCAGGGGAAGTATATTTGTGGAGACAAGATGGAAGAAACTACGGGTGGGCGATCTCATCAAAGTGTACAAGGACGAGTACTTCCCTGCTGATCTTCTTCTGCTTTCCTCGAGTTATGAGGATGGGGTTTGCTATGTTGATACAATGAATCTTGATGGAGAAACCAATCTAAAACTAAAGCATGCTTTGGAAGTCACAGAAAATCTTCACGATGAAAAATCCCTTGAAAAGTTTAGGGGAGTGATCAAATGTGAGGATCCTAATGAAAATTTGTACTCATTTGTTGGAACCTTGTACTTTGAAGACAAAGAATATCCACTTTCCTTGCAACAGATTCTTTTAAGAGAATCCAAGCTGAAAAACACTGAATATGTTTATGCTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATGCCACGGATCCACCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAAATAATCTACATCCTCTTTAGTACCTTGGTCTTCATATCTTTTATTGGCTCTGTCTATTTTGGCATTGAGACAAAAATGGATCTTGGCGACAGCAACTACAGAAGATGGTATCTTCGTCCAGGCAGTACGACAGTGTTTTATGATCCTAGAAGGGCAACACTTTCTGCTATTCTCCATTTTCTAACTGCCCTCATGTTGTATGGATATCTAATTCCCATCTCACTATATGTATCCATTGAAATTGTGAAAGTCTTGCAGAGTGTTTTCATCAACCATGATTGGGAAATGTATTGTGAAGATGCTGATAGGCCAGCTCATGCTCGCACATCTAATTTAAATGAGGAACTTGGGCAGGTTAATACCATATTGTCTGACAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTGAAATGTTCCATAGCAGGCACTCCATATGGTCGTAGTAGGACAGAAGTGGAGATGGCACTTGCACGGAGGGTGAGAAGTCAGGAACCGGAGAGCGGTGGTTTATCATCTGATTTACAGGACCAGAATCATGATGCTGTGGATTCCAGGCAGCCAGTTAAGGGTTTCAACTTTAGAGATGAACGTATAATGAATGGGAAATGGGTTAATGAACCTCATTCAGACATCATACAAAAATTCTTTAGAGTTTTAGCAATCTGTCATACAGCTATTCCTGATGAAGATGACCAATCTGGAGAAATTTCCTATGAAGCTGAGTCGCCAGATGAAGCAGCTTTTGTCATAGCTGCTAGGGAACTTGGTTTTGAATTTTTTGCAAGGACACAAACAAGCATATCATTGCATGAATTGGACTTTGAGAGCGGGGAAAAGGTTGACAGAGTGTACGAGCTTCTGCATGTCTTAGAGTTCAGTAGTTCCCGCAAAAGAATGTCAGTGGTTGTAAGGAATGAAGAAGGTCGACTACTACTCCTATGCAAGGGTGCAGACAGTGTTATGCTTGAAAGACTCTCCCAAGATGGAAGAAAATTTGAGGCTGAGACTGTAGATCATATCAAAAGATATTCTGAGGCGGGTTTAAGAACTCTGGTAATCGCATACCGTGAACTTGGCGAAGAAGAATATAAGTTGTGGGAAAGGGAGTTTTTAAATGCGAAAACTTCTGTAGCTGCAGACCGTGATGTGTTGGTGGATGCAGCTGCTGATAAAATGGAAAGAGACTTAATTCTTCTTGGTGCAACAGCAGTTGAGGACAGACTGCAGAAAGGGGTTCCCGAATGTATCAATAAGCTTGCCCTGGCAGGAATAAAATTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGCAGTTTACTTAGGCAAGACATGAAACAGATAGTGGTAACTCTGGATTCACCAGATATCCTATCCTTAGAAAAACAAGGGGACGAAGAGGCTCTCACGAAGGCCTCTCTTGAAAGCGTTAAGAAGCAAATTGGAGAGGGAATTTCACAAATCAGGTCTGCTAAAGATGATTCTACTGAATTCGGCTTGATAATTGATGGGAAATCATTGAGTTATTCTCTTAACCAGAACGTTGAGAAGTCATTTTTTCATCTGGCCATTAATTGTGCTTCTGTCATTTGTTGTCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGATTGGTGAAACTGAGAACTGGGAAGACAACACTATCAATTGGTGACGGTGCAAATGATGTTGGCATGCTTCAGGAAGCTGATATAGGAGTTGGTATAAGTGGCGCTGAAGGGATGCAGGCTGTGATGGCAAGCGATTTTGCATTAGCTCAGTTTCGATTTCTGGAGCGTTTGTTGCTGGTACATGGCCACTGGTGTTATAGACGAATCGCAATGATGATATGCTATTTTTTCTATAAGAACATCGCATTTGGATTTACTCTGTTTTGGTTTGAGGGGTACGCTTCTTTCTCTGGACAGCCTGCATACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCTGTAATTGCTATGGGCGTTTTCGACCAGGATGTTTCTGCCCGACTTTGCCTCAAGTATCCTTTTTTATATCGTGAGGGAATAGAGGACATCCTCTTCAGCTGGCCGCGGATTCTCGGGTGGATGTTTAATGGCGTGGTCACTTCCTTGATCATCTTCTTCTTGACCACAAACTGTGTCTTGAACCAGGCCTTCAGAAGTGATGGCCATGTTGTTGATTTGGAAATACTAGGGGTCACAATGTACACTTGTGTGGTGTGGACTGTGAATGGCCAAATGGCATTATCCATTAACTACTTCACTTGGATTCAGCATTTTTTCATATGGGGCAGCATTGTCTTCTGGTATGTGTTCTTGTTGGTTTATGGCTATTTACCTCCAGCAATATCCACAACAGCTTACAAGGTTCTTGTTGAAGCCTGTGCTCCCAGTGGTCTCTATTGGCTTGTTACTCTTTTCGTCGTCGTGTGTGCTCTTCTTCCTTATTTCTCGTATCGGTCTTTCCAGACTCGGTTTCTACCAATGTACCATGATATTATTCAGAAAAGACAGGTGGAAGGGTCCGAAACCGAGACGTCTAAAGACCTGCCGAAGAACGTCGAGGGCAGGCTAAGCCATCTGAGAGAAAGATTGAAGCAAAGGGACTTGTAA 3558 0.4168 MPQRPKRRIQFSKLYSFSCLKSPFRHEQSQIGQRGYSRVVYCNDPDNPEAVQLNYVGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACLSFSPLAPFTALSIVAPLLVVMGATMAKEAVEDWRRRKQDIEANSKKVNVLRGSIFVETRWKKLRVGDLIKVYKDEYFPADLLLLSSSYEDGVCYVDTMNLDGETNLKLKHALEVTENLHDEKSLEKFRGVIKCEDPNENLYSFVGTLYFEDKEYPLSLQQILLRESKLKNTEYVYAVVIFTGHDTKVMQNATDPPSKRSKIERKMDKIIYILFSTLVFISFIGSVYFGIETKMDLGDSNYRRWYLRPGSTTVFYDPRRATLSAILHFLTALMLYGYLIPISLYVSIEIVKVLQSVFINHDWEMYCEDADRPAHARTSNLNEELGQVNTILSDKTGTLTCNSMEFVKCSIAGTPYGRSRTEVEMALARRVRSQEPESGGLSSDLQDQNHDAVDSRQPVKGFNFRDERIMNGKWVNEPHSDIIQKFFRVLAICHTAIPDEDDQSGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELDFESGEKVDRVYELLHVLEFSSSRKRMSVVVRNEEGRLLLLCKGADSVMLERLSQDGRKFEAETVDHIKRYSEAGLRTLVIAYRELGEEEYKLWEREFLNAKTSVAADRDVLVDAAADKMERDLILLGATAVEDRLQKGVPECINKLALAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVVTLDSPDILSLEKQGDEEALTKASLESVKKQIGEGISQIRSAKDDSTEFGLIIDGKSLSYSLNQNVEKSFFHLAINCASVICCRSSPKQKARVTRLVKLRTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFALAQFRFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWFEGYASFSGQPAYNDWYMSFYNVFFTSLPVIAMGVFDQDVSARLCLKYPFLYREGIEDILFSWPRILGWMFNGVVTSLIIFFLTTNCVLNQAFRSDGHVVDLEILGVTMYTCVVWTVNGQMALSINYFTWIQHFFIWGSIVFWYVFLLVYGYLPPAISTTAYKVLVEACAPSGLYWLVTLFVVVCALLPYFSYRSFQTRFLPMYHDIIQKRQVEGSETETSKDLPKNVEGRLSHLRERLKQRDL 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1572 1185 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Acco06g1572 1185 Pfam E1-E2 ATPase 136 317 - -
Acco06g1572 1185 Pfam Cation transport ATPase (P-type) 526 628 - -
Acco06g1572 1185 NCBIfam HAD-IC family P-type ATPase 836 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1572 1185 NCBIfam HAD-IC family P-type ATPase 357 455 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1572 1185 Gene3D - 701 905 IPR023214 -
Acco06g1572 1185 Gene3D - 110 286 - -
Acco06g1572 1185 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1154 - -
Acco06g1572 1185 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1143 IPR023298 -
Acco06g1572 1185 CDD P-type_ATPase_APLT_Dnf-like 57 1025 - -
Acco06g1572 1185 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Acco06g1572 1185 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 660 IPR023299 GO:0000166
Acco06g1572 1185 Coils Coil 116 136 - -
Acco06g1572 1185 SFLD Haloacid Dehalogenase 405 916 - -
Acco06g1572 1185 FunFam Phospholipid-transporting ATPase 116 285 - -
Acco06g1572 1185 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1143 IPR032630 -
Acco06g1572 1185 Gene3D - 559 700 IPR023299 GO:0000166
Acco06g1572 1185 SUPERFAMILY HAD-like 418 920 IPR036412 -
Acco06g1572 1185 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Acco06g1572 1185 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Acco06g1572 1185 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Acco06g1572 1185 PRINTS P-type cation-transporting ATPase superfamily signature 189 203 - -
Acco06g1572 1185 FunFam Phospholipid-transporting ATPase 700 905 - -
Acco06g1572 1185 NCBIfam phospholipid-translocating P-type ATPase 55 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco06g1572 1185 MobiDBLite consensus disorder prediction 461 484 - -
Acco06g1572 1185 FunFam Phospholipid-transporting ATPase 543 701 - -
Acco06g1572 1185 SFLD p-type atpase 405 916 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1572 Acco-ChrAcco06 11114234 11120701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1572 9 1156 Primary Pumps ATPases AT1G68710 63.875 0.0 1590