Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1569 ATGATGATGGCGTCTTCATCAAGCTACAACTCTCCATGTGCGGCGTGCAAGTTCCTGAGAAGGAAGTGCATGCCGGACTGCATATTTGCGCCGTATTTTCCACCGGAAGAGCCACAAAAATTCGCCAATGTTCACAAGATATTTGGAGCAAGCAACGTGAGCAAGCTCCTGAACGAAGTGCTGCCACATCAGAGAGAGGATGCAGTGAACTCTCTGGCTTATGAAGCCGAGGCTCGTATAAAAGATCCGGTGTATGGCTGTGTTGGAGCCATCTCTGTGCTTCAGAGACAAGTGATTAGGCTCCAAAAGGAACTTGATGCCACTAATGCTGAAATGATTCGCTACACTACTGCTTGTACTGAAATTATTCCCACTCATCATCATCATCATCACGATGCTGCAACTAGAATGTTGGGTAATAATGAAGGACCTGTTGTTGGAGGTTCGTCGTCGTCTCTTCTTGCTCAATCTCCTTCTTCTGCTGCTTTTTACTATCCTTCTCCTTGGAATAATGATCTTTCTGGCGATGCCTTTCACCACATTCACTGA 549 0.4608 MMMASSSSYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNAEMIRYTTACTEIIPTHHHHHHDAATRMLGNNEGPVVGGSSSSLLAQSPSSAAFYYPSPWNNDLSGDAFHHIH 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1569 182 Coils Coil 91 111 - -
Acco06g1569 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 130 - -
Acco06g1569 182 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Acco06g1569 182 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1569 Acco-ChrAcco06 11085123 11085671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1569 2 120 AS2 family AT5G63090 82.353 6.92e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco06g1569 LOB 5.1e-42 No_clan