Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1567 ATGGCGACTCCTGTCAACGGTGTTTCCTCTTTATCGGAGGTTCAGAATTCAGTTTCTGCGATAGATTCCAGTCCTTCTTCGACATTTTGGACTCCTCGGCCGTCTCGATCTTCTCTAAGAACGTCTAGAAATCTTGGGGTTTCTTCTGCATTTTATTTTACTGGTCATGGTAATGACTACGCAACGAAGCCCATCAACAATCATAAGAGTTGTGTAATTAATCGGAGGAATTCTTATCTGGACTCCGACAATGTGAAGCACGAAGAGTTACCAAATGCGTCAAAGCTGTATGACAACTATGGTGGAAAATCTGACCGTTTAAGCCTCCCTGAAAATGGAGAAAGTTGTTTCGGGGAGAGAAGCTGTGCCATTGAACGATTTGATATTTCCACCAATTGTGATTCAAGTAGTAGCGAATTCGAATCTGGAGGTTCATCAAGAGGGGCTGATCCAATAATGAAAAGTTACTGTCATTCAGAGATTAGTTTTTGTCCAACTCCTCAGAGTAGTTTCTATTCTTCCACTTTCTATACCGAAGCCAAACAAAGTTTTTCTAATACTGAATTCAGTGAGGGAAGTTTTTCTAATACTGATTTCAGTGAGGGTGTTAGTGTAAGTGATGGTACTGATACGAGCATCAACAGTACTTTAAACAACTATTTGTATAGACCCCACAAGACAAGTGATGTAAGATGGGAAGCAATTCAAACGATCCGAGAACGTGATTGGCTCTTGGAAATGAGACATTTCAGTGTGTTGAAGACATTGGGACGTGGAGACATAGGAAAAGTTCATCTTGCTGAGTTGACTGGCACAGGAACTTATTTTGCCATGAAAATTATGAATAAAGAAGAGCTAGCAAGGCGCAAGAAGCTTCCGAGGCTTCAGACAGAAAGAGAGATATTGCAATCTTTGGATCATCCATTTCTGCCCACATTATATGCACACTTTGAGACAGAGAGATTCTCTTGCTTAGTAATGGAGTTCTGCCCTGGTGGGGACCTGCATGCACTCAGGCAAAGACAACCTGGGAAATATTTCTCAGAGGATGCTGCCAGGTTCTATGTGGCAGAGGTGCTACTTGCTTTGGAGTACTTGCACATGATGGGGATTATCTACCGAGACCTTAAACCTGAGAATGTGTTAGTGAGAGAAGATGGTCACATAATGCTGTCAGATTTCGACCTCTCTCTGAGATGCCCTGTGAGCCCAACTCTAGTAAGATCACCAAGCCCTTACATGGACACAAAAAGCTCAAGTCACCTCTCTCCAGCTCTTTGCATTCTTCCCACTTGTGTCATGCAGCCAGATTGCATCCAACCTGCATGTTTCACTTTCGCACCTCGCAAACGATCTGCAAAGTCCAATAAGTTGAAAACCAGAATTGAAATGCATCATCGTCACCGTGTGACCCATCTTCCTGAGCTCATTGCAGAGCCAACAAATGTACGTTCAATGTCCTTTGTGGGCACTCATGAGTACTTAGCTCCTGAGATTATTAAAGGAGAAGGGCATGGTAGTGCTGTGGACTGGTGGACTTTTGGGATATTCTTATATGAGCTTCTGTTTGGTAGAACTCCGTTCAAAGGCTCAGCAACTAGAGCAACTGTGCTGAATGTAACGAGTCAGCCATTGAGTTTCCCAGAATCACCAAGTGTCAGCTTTGCTGCTAGAGACCTGATAAGGGGTTTGCTTGTGAAAGAGCCACTTCATCGTCTTGCTTATAGACGTGGAGCTGCTGAGATCAAACAACATCCATTCTTTCGCAATGTTAACTGGGCACTCATTCGCTGCACTCAGCCTCCAGAGGTCCCCAGAAACGCCATGAAGCCTCTCTCCCTTGAAAATATGGATGCCACAGTTTTGAAGCCTTCTTCTGTTAGATATTCAGATGTTGATTACTTTTGA 1908 0.435 MATPVNGVSSLSEVQNSVSAIDSSPSSTFWTPRPSRSSLRTSRNLGVSSAFYFTGHGNDYATKPINNHKSCVINRRNSYLDSDNVKHEELPNASKLYDNYGGKSDRLSLPENGESCFGERSCAIERFDISTNCDSSSSEFESGGSSRGADPIMKSYCHSEISFCPTPQSSFYSSTFYTEAKQSFSNTEFSEGSFSNTDFSEGVSVSDGTDTSINSTLNNYLYRPHKTSDVRWEAIQTIRERDWLLEMRHFSVLKTLGRGDIGKVHLAELTGTGTYFAMKIMNKEELARRKKLPRLQTEREILQSLDHPFLPTLYAHFETERFSCLVMEFCPGGDLHALRQRQPGKYFSEDAARFYVAEVLLALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLSLRCPVSPTLVRSPSPYMDTKSSSHLSPALCILPTCVMQPDCIQPACFTFAPRKRSAKSNKLKTRIEMHHRHRVTHLPELIAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSATRATVLNVTSQPLSFPESPSVSFAARDLIRGLLVKEPLHRLAYRRGAAEIKQHPFFRNVNWALIRCTQPPEVPRNAMKPLSLENMDATVLKPSSVRYSDVDYF 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1567 635 Pfam Protein kinase domain 485 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1567 635 Pfam Protein kinase domain 251 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1567 635 CDD STKc_phototropin_like 248 606 - -
Acco06g1567 635 Gene3D Phosphorylase Kinase; domain 1 608 621 - -
Acco06g1567 635 FunFam serine/threonine-protein kinase D6PK-like 334 401 - -
Acco06g1567 635 SMART serkin_6 250 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1567 635 ProSiteProfiles Protein kinase domain profile. 250 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1567 635 Gene3D Transferase(Phosphotransferase) domain 1 334 407 - -
Acco06g1567 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Acco06g1567 635 FunFam serine/threonine-protein kinase D6PK-like 483 606 - -
Acco06g1567 635 Gene3D Transferase(Phosphotransferase) domain 1 484 607 - -
Acco06g1567 635 SUPERFAMILY Protein kinase-like (PK-like) 223 610 IPR011009 -
Acco06g1567 635 PANTHER FLIPPASE KINASE 1-RELATED 169 610 - -
Acco06g1567 635 MobiDBLite consensus disorder prediction 19 41 - -
Acco06g1567 635 FunFam Serine/Threonine Kinase 248 334 - -
Acco06g1567 635 Gene3D Phosphorylase Kinase; domain 1 248 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1567 Acco-ChrAcco06 11040665 11043420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1567 171 612 AGC Kinase Gene Family AT3G27580 66.098 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco06g1567 Pkinase 4e-38 CL0016