Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1563 ATGAGTTTCGGTTTCGGCCTTGTAGGTTCAAGGCTGATGGTGGGTGAATGGTCTGTTTTGCTTACAGCAATGAGTTGGCTTATTGATGTTGGAGGCTTTGCAAAGAAAGTGAAAGGCAGTTCTCTGCCCTCAGCTGAGCAGATCAAAGACTGTGGGGCATATCGTGAATGCCCAAATTGTCACTGGCATATTGATAATAGTGATGTACGCTGGAATTTAGCCCTTATTATCATTCACTGTTCATTATTGCCTTCAATATTAATTATGTCTACCAATTTGGAAAGCTTGGGACTCTGTTCTTGTAGTAAAGCTCTTCATGTTTCTCTAGTATTTGCACTTGCTCTAACTTCTGTTTTCCCCAAATGGCCTGGCTTTCCTGTTGGTGTAAAATTTGATCCTTCTGATATAGAACTCTTAGAACATTTAGCAGCAAAATGTGGCATTGGAAATGCAGAGCCACACATATTCATCCATGAGTTCATTCTAACGCTGGAGGGTGATGAGGGTATTTGCTACACTCATCCAGAAAATCTTCCAGGTGCTAAAAAAGATGGGAATAGTGTTCATTTCTTTCACAGAGCCATTAATGCCTATGCATGTGGTCAACGAAAGCGTCGAAAGATTCATCATGATCATGGTGCAACTGAGGAGCATGTGCGGTGGCACAAGACTGGTAAGACCAAATCTGTGATGGAAGATGGCATACACAAAGGCTTTAAAAAGATCATGGTTCTTTATATAAAACCCGAGAAAGGTTCAAAGCCACATAAATCCAACTGGGTGATGCATCAATACCATCTGGGGACTGAGGAAGAGGAGAAGGAAGGTGAATATGTGGTCTCAAAGGTTTTTTATCAAAGGAAGCAGCTCGAGAAAAATGAGGAGAATCCATTAGTTGAAGAATCAGATAATAATACATTACGAACAAGTCCAAGAACCCCAAATCCAAATCCACGCAATCCACGAACAAGTCCAAGAACCCCAAATCCAAATCCTCGCAATCTACCTCGACCAGGAAATTCTGCTGACTGTGATGATAATTTTGATGAGAAAGTACTTTTGCCATTTAACAAGGAGGCCGGGTCTCCTCCTGGAGAGCCAAGTGCCCTACCAATTGATGTCCAGCATGAGGGTGATAAAAGTGGCCCTGCATGGTTGGCTGGTGAATCACAGGCTGCCTTTGATGGCTTGGATGACTTATTATGCAAGGAGATCTTTGATTCTTTTGCTCAATTAGATGATGATGGAATGAACTCCACTGTAAATGGCTTTGCCAGCAACTCAAACTTGTTAGCCAGAAACGATAATGCATCCTTTGGAATCCCTGCCCTGGATAACCTGGAATTGGGTACTCCTCCAGATTTCCAACTTTCTCTTCCCGGAAGTGTTCTGTTCACTTACCTTGATGCCGAGAGACACTACTGGCTATGTCAGGTTCCTGAACTCTTTCAGCTTCCAGCTAAGCCGACACCCGAGTTTGAGCACTCTGCATATGGCTAG 1500 0.4307 MSFGFGLVGSRLMVGEWSVLLTAMSWLIDVGGFAKKVKGSSLPSAEQIKDCGAYRECPNCHWHIDNSDVRWNLALIIIHCSLLPSILIMSTNLESLGLCSCSKALHVSLVFALALTSVFPKWPGFPVGVKFDPSDIELLEHLAAKCGIGNAEPHIFIHEFILTLEGDEGICYTHPENLPGAKKDGNSVHFFHRAINAYACGQRKRRKIHHDHGATEEHVRWHKTGKTKSVMEDGIHKGFKKIMVLYIKPEKGSKPHKSNWVMHQYHLGTEEEEKEGEYVVSKVFYQRKQLEKNEENPLVEESDNNTLRTSPRTPNPNPRNPRTSPRTPNPNPRNLPRPGNSADCDDNFDEKVLLPFNKEAGSPPGEPSALPIDVQHEGDKSGPAWLAGESQAAFDGLDDLLCKEIFDSFAQLDDDGMNSTVNGFASNSNLLARNDNASFGIPALDNLELGTPPDFQLSLPGSVLFTYLDAERHYWLCQVPELFQLPAKPTPEFEHSAYG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1563 499 SUPERFAMILY NAC domain 115 286 IPR036093 GO:0003677|GO:0006355
Acco06g1563 499 Gene3D NAC domain 134 291 IPR036093 GO:0003677|GO:0006355
Acco06g1563 499 MobiDBLite consensus disorder prediction 294 382 - -
Acco06g1563 499 Pfam No apical meristem (NAM) protein 126 267 IPR003441 GO:0003677|GO:0006355
Acco06g1563 499 ProSiteProfiles NAC domain profile. 125 286 IPR003441 GO:0003677|GO:0006355
Acco06g1563 499 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 24 355 IPR044799 GO:0003700
Acco06g1563 499 MobiDBLite consensus disorder prediction 314 335 - -
Acco06g1563 499 FunFam NAC domain-containing protein 8 134 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1563 Acco-ChrAcco06 10995582 10998934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1563 123 286 NAC Transcription Factor Family AT4G28500 60.976 1.04e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g1563 NAM 5.4e-20 No_clan