Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1543 ATGGCCTTTTCATCTTCCTCTTGCAAAGCCCTATCTGTGCTGCTGATCTTGACCAGAGTCCTGTACTGTGCGTCTGGTTTTGAGTTCCAAGTGGGAGGATCAAAAGGGTGGGTGGTCCCACCTGCCAATGACACCAACATCTACCTTGAATGGGCTTCACAAAATAGGTTCCAAGTGGATGATTCCATACGGTTTAAGTACCAGAAGGACTCAGTGATGGAGGTGGATGAAGAAGGCTACAAGAGCTGCAATTCCAGTCTCCCAGTCATGTTCTCCAACAATGGGAACACACTGTTCACCTTCCGCCATGCGGGCTCTTTCTACTTCATTAGTGGTGCCTCTGGGCATTGCCAGAAAGGTCAGAAGATGATTGTGAGGGTGCTCTCTCACAACGACTCCTCCTCCTCCTCCTCTATTCCTGATCAAGATCACCATCCTCATGCCTCTTCTTCTGCTTTCCCTCCACAAGTTTCGCCGCTCGTCCTCAACATTGTCTTCTTTGTGGCTTCTTATATTATTTGA 522 0.4847 MAFSSSSCKALSVLLILTRVLYCASGFEFQVGGSKGWVVPPANDTNIYLEWASQNRFQVDDSIRFKYQKDSVMEVDEEGYKSCNSSLPVMFSNNGNTLFTFRHAGSFYFISGASGHCQKGQKMIVRVLSHNDSSSSSSIPDQDHHPHASSSAFPPQVSPLVLNIVFFVASYII 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1543 173 FunFam Early nodulin-like protein 1 26 132 - -
Acco06g1543 173 Gene3D - 26 134 IPR008972 -
Acco06g1543 173 CDD OsENODL1_like 27 128 IPR041846 -
Acco06g1543 173 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Acco06g1543 173 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Acco06g1543 173 PANTHER BLUE COPPER PROTEIN 28 137 IPR039391 GO:0009055
Acco06g1543 173 Pfam Plastocyanin-like domain 46 121 IPR003245 GO:0009055
Acco06g1543 173 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1543 Acco-ChrAcco06 10861860 10862462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1543 6 128 Phytocyanin Superfamily AT3G18590 50.400 1.00e-41 136