Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1502 ATGCATTATGAGAAGCAGCTATGGGTCGTAAGTCCCTCCGACAGGGGCAACAGACACAGTGCTTTCCCTGTAGGATATGCTTTTGCTTTATCACATGGATGGTGCAGAATAGATGCTTGGCTTCAAAGGCTACATTATATCTTGTCAAAACCTTCAAAATCTCATCTGACTATTATAACTGCTAATTGTTTTAAATATTCATTCTCGGCTATGAACAATGACTGTCCTTCACATGATTTTCAAGTAAGAGCATACGCACAAAGATTCCTGATCCCATTGAGATGTTCCTGCCAATCTTTTGACCAAGTTATCCCAAACCCAAGATATTCGATCGTTCGCCTATCCGGAGGAAGCTTTACACCTGAAAGCCTTGCCCCATTTTCCTCTATTCTGATTCCACTCAAGAAGTCAAACATGTGGAACACTGAACTCTGTATTGGTTTAGCTGCGGGTATAGTTGGGATTTGCATTGTTTTAGCTGCAGCCATCATTGTAATCAGATTAAAGGACAAAAGGGAAGAGAATGGGATTGGGAAAGGAAGAGACTTGGAGCTTCAGCATCTCAACCTCAGTGTAAGAACAACCTGCGACAAGAAGGTTTCTTTCGAGGGATCACCTGACACTCTTAAAGGCAAAATCATCGACATCACACCACGTAGGATGCTCATGGAGACATACACTATTGAAGAGTTAAGAAAAGCAACTGAGGACTTCAGTTCAACTAATCAAATTCAGGGACCTGTGTTTCATGGTCGCCTCAATGGGAAGAACATGGCAATCAAGCGCACAAACACAGAGACACTGACAAAGATAGATTTTGGACTCTTCAATGAAGCACTTCCCCACCACCCCAACATCCTTAAACTCCTCGGAACGTGCTCAACTGATGACGAGCATCCTGAATCATATCTGGTTTTTGAATTCGCAGAAAATGGATCTCTGAGAGACTGGCTTCACGGTGGGCTGGCCATCAAGAACCAGTTCATTGCTTCCTGCTATTGTTTCCTTTCATGGAGACAGAGGATAAGGATCTGCCTTGACGTGGCCATGGGTTTGCAGTATATGCACCACGTGATGAACCCAAGCTACGTGCATAGAAATGTGAAGAGCAGAAACATATTTTTAGATGAAGACTTTGGTGCCAAGTTAGGGAATTTTGGGATGGCAGGGTGTGTTGAGAATGAACCTGAGGACCCACTTTCATGTTCAACCAATCCTGCTTCTTGGAGCCTAGGCTATTTGGCACCTGAATATGTGCACCAAGGTACAGTTTCCCCAAGTATTGATATTTTTGCTTATGGGGTAGTTTTGCTGGAGATGCTTTCAGGTCAAACACCTACAAGCAAGCCTAATGAGAAAGGAGAAGGAAGTATTTGGCTTACTGAGAAAATCAAGTCCATTTTGAAGTCAGAGAATATGTATGAACTAAGAGATTGGATGGACAGTGCATTGGGTGAGAATTACTCATTCGATGCAGCCATCACAGTGGCAAAACTTGCAAGAGCTTGTGTAGATGAAGACTCCTCTCTAAGGCCATGTGCTGGTGAAGTTGTTGAGAAGCTTTCAAGATTGGTTGAGGAATTGCCTGATGAAGAGCATTTATTTTTGTCTGAAAGCTCAACAAAACCTCTGGTCAAGACAGCTGCAAACAATCAGTTGAAAAAAATGTACTGA 1674 0.4283 MHYEKQLWVVSPSDRGNRHSAFPVGYAFALSHGWCRIDAWLQRLHYILSKPSKSHLTIITANCFKYSFSAMNNDCPSHDFQVRAYAQRFLIPLRCSCQSFDQVIPNPRYSIVRLSGGSFTPESLAPFSSILIPLKKSNMWNTELCIGLAAGIVGICIVLAAAIIVIRLKDKREENGIGKGRDLELQHLNLSVRTTCDKKVSFEGSPDTLKGKIIDITPRRMLMETYTIEELRKATEDFSSTNQIQGPVFHGRLNGKNMAIKRTNTETLTKIDFGLFNEALPHHPNILKLLGTCSTDDEHPESYLVFEFAENGSLRDWLHGGLAIKNQFIASCYCFLSWRQRIRICLDVAMGLQYMHHVMNPSYVHRNVKSRNIFLDEDFGAKLGNFGMAGCVENEPEDPLSCSTNPASWSLGYLAPEYVHQGTVSPSIDIFAYGVVLLEMLSGQTPTSKPNEKGEGSIWLTEKIKSILKSENMYELRDWMDSALGENYSFDAAITVAKLARACVDEDSSLRPCAGEVVEKLSRLVEELPDEEHLFLSESSTKPLVKTAANNQLKKMY 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1502 557 Gene3D Phosphorylase Kinase; domain 1 215 308 - -
Acco06g1502 557 SUPERFAMILY Protein kinase-like (PK-like) 217 521 IPR011009 -
Acco06g1502 557 Pfam Protein kinase domain 250 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1502 557 Gene3D Transferase(Phosphotransferase) domain 1 309 541 - -
Acco06g1502 557 FunFam PTI1-like tyrosine-protein kinase 3 309 534 - -
Acco06g1502 557 ProSiteProfiles Protein kinase domain profile. 171 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1502 557 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 129 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1502 Acco-ChrAcco06 10546624 10550165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1502 70 549 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 38.230 3.53e-106 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco06g1502 Pkinase 1.8e-31 CL0016