Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1476 ATGGAGTGGTACTCAAGAGAGTCAGTGTGGGAGCCACTGAGAGGTCAGCCAATCGTTGGAGAAGCATCGGTGGAGAAATCAGTGTCAGTTGCGGAGACAGAGATGTCGAATTCAAAATCATCATCATCAAAGACGAAGAAGCGCGTGTACCAAAAATCGCCGGAGAAGGTGAAGTGCTCGGTGGATGGATGTAACTTTGACCTGGGGACTTTCCGGGAGTATCACCGGCGGCACAGGGTGTGTCAACCTCACTCCAAGACCTCTTGTGTGATTGTGAAGGGACAGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCGCTGGATGAGTTTGATGGCTTCAAGCGGAGCTGTAGGAGACGTTTAGAGGGGCATAATAAGCGCAGAAGGAAACCTCGTCCTTCACCTCTCGCCTTCTCTGCAGATTACAAAGGACCCAGAATCCTGCAATTTGGAAATCCTACGAGTGATGATCGTTACGTGAGTATGTGGAGTGCTCAACCTGGTAGGAGCTGCTATAATCGTTTCCCACCAATTCTGCCAAAGACTGAGATTGAGCAACAGAGCAGTGTGGAAGGTTGTGCATTTGCCAACATAGAAAATATGCAGGTGAAAAATGAGAATGAAGGAGAAAGTCGAGGATTAAGCATGTATTGGTTTAATAATAATAATAATAATGAAGCAGTTCCGGCATTAGCAGCAGTATCAGCAGGAGCTGGAATCGGAGACAAGAACCGGAAGATTCCTTCGGATTCTGCTCTCTATCTTCTGTCAGCACTTCAGGTGCAGAGTTCCTCGGAGTTTAGTATGGTAGAGTCTAGTCTAGATTGTCCAGTTCAATCCCAGCCTCCATTTGAAGAAGACGATGGAACCCTAAACTGTTCCAGTTCAAGGAGATTGGAAGTGAAACCTAATGAAACAGAGTTTGATCACAATGGAATGATTCAAATGGAGCTCCAGGTGATGAACCACAGTCCAGGACGATCACTCACGCTCCCTTTTTTCTGGGAGTAA 1017 0.4661 MEWYSRESVWEPLRGQPIVGEASVEKSVSVAETEMSNSKSSSSKTKKRVYQKSPEKVKCSVDGCNFDLGTFREYHRRHRVCQPHSKTSCVIVKGQEQRFCQQCSRFQSLDEFDGFKRSCRRRLEGHNKRRRKPRPSPLAFSADYKGPRILQFGNPTSDDRYVSMWSAQPGRSCYNRFPPILPKTEIEQQSSVEGCAFANIENMQVKNENEGESRGLSMYWFNNNNNNEAVPALAAVSAGAGIGDKNRKIPSDSALYLLSALQVQSSSEFSMVESSLDCPVQSQPPFEEDDGTLNCSSSRRLEVKPNETEFDHNGMIQMELQVMNHSPGRSLTLPFFWE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1476 338 MobiDBLite consensus disorder prediction 29 44 - -
Acco06g1476 338 SUPERFAMILY SBT domain 57 138 IPR036893 GO:0003677|GO:0005634
Acco06g1476 338 ProSiteProfiles Zinc finger SBP-type profile. 56 133 IPR004333 GO:0003677
Acco06g1476 338 Pfam SBP domain 59 132 IPR004333 GO:0003677
Acco06g1476 338 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 259 IPR044817 GO:0003677
Acco06g1476 338 MobiDBLite consensus disorder prediction 29 49 - -
Acco06g1476 338 Gene3D - 49 120 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1476 Acco-ChrAcco06 10400393 10401599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1476 59 152 SBP-box Gene Family AT5G50670 56.122 7.74e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco06g1476 SBP 4.3e-29 No_clan