Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1475 ATGGAGAATTATACCATGCTGTTCCCTGGTCCTACTTCTTCCTCTTCAAGCTATCAAATGCCAACAAGTTCCATGGGAGGCTCTTATTATCATGGATTTAGTAACAACTTTTCGGGCCAAATCTCGAATAGGCTTCTGGGTTTGAGGCCTGATGATGAGAAAAGAGGGGAAGTTTCTCATCAGAGCGGAAATGTGAAGGAAGATGAAGGGACGGGGAAAAAGAAAGGAGAGAAGAAGGTCAGAAAGCCAAGATTTGCTTTCCAAACTAGGAGCCAGGTTGACATTCTTGACGATGGCTACAGGTGGAGAAAATATGGTCAGAAAGCTGTTAAAAACAACAAATTCCCCAGGAGCTACTACAGATGTACATATCAAGGGTGCAATGTAAAGAAGCAAGTGCAGCGTCTAACGAAAGACGAAGGGGTAGTGGTGACCACATATGAAGGAGTTCACACTCATCCTATTGACAAGACAACCGACAACTTCGAACACATCTTAAGTCAGATGCAAATATACACTCCCTTTTAA 528 0.4299 MENYTMLFPGPTSSSSSYQMPTSSMGGSYYHGFSNNFSGQISNRLLGLRPDDEKRGEVSHQSGNVKEDEGTGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIDKTTDNFEHILSQMQIYTPF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1475 175 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g1475 175 SMART WRKY_cls 96 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1475 175 FunFam WRKY transcription factor 57 82 156 - -
Acco06g1475 175 MobiDBLite consensus disorder prediction 52 76 - -
Acco06g1475 175 Gene3D WRKY domain 81 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1475 175 SUPERFAMILY WRKY DNA-binding domain 88 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco06g1475 175 ProSiteProfiles WRKY domain profile. 91 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1475 175 MobiDBLite consensus disorder prediction 52 84 - -
Acco06g1475 175 Pfam WRKY DNA -binding domain 97 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco06g1475 175 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 158 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1475 Acco-ChrAcco06 10388056 10389540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1475 84 175 WRKY Transcription Factor Family AT5G13080 86.957 1.65e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco06g1475 WRKY 2.4e-26 CL0274